Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   Q3V63_RS09120 Genome accession   NZ_CP130545
Coordinates   1885206..1886249 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain SA05-SX     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1880206..1891249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V63_RS09090 - 1880627..1881883 (-) 1257 WP_001795108.1 aminopeptidase -
  Q3V63_RS09095 - 1881886..1882086 (-) 201 WP_000180460.1 DUF1128 family protein -
  Q3V63_RS09100 - 1882233..1882697 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  Q3V63_RS09105 - 1882704..1882979 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  Q3V63_RS09110 - 1883257..1884474 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  Q3V63_RS09115 vraR 1884587..1885216 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  Q3V63_RS09120 vraS 1885206..1886249 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  Q3V63_RS09125 liaF 1886246..1886947 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  Q3V63_RS09130 - 1886962..1887348 (-) 387 WP_001110179.1 hypothetical protein -
  Q3V63_RS09135 map 1887565..1888323 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  Q3V63_RS09140 - 1888881..1889840 (+) 960 WP_234718382.1 aromatic acid exporter family protein -
  Q3V63_RS09145 - 1890271..1890684 (-) 414 WP_001557448.1 hypothetical protein -
  Q3V63_RS09150 - 1890713..1890823 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=860150 Q3V63_RS09120 WP_001017131.1 1885206..1886249(-) (vraS) [Staphylococcus aureus strain SA05-SX]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=860150 Q3V63_RS09120 WP_001017131.1 1885206..1886249(-) (vraS) [Staphylococcus aureus strain SA05-SX]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1