Detailed information NTG0859744

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: WBG99_RS30130
• Genome accession: NZ_CP147520
• Coordinates: 6871828..6873183 (+)
• Length: 451 a.a.
• NCBI ID: WP_338899316.1
• Uniprot ID: -
• Organism: Streptomyces sp. TG1A-60
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6866828..6878183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
-	rarA	6871828..6873183 (+)	1356	-	-	Machinery gene

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48339.82 Da
• Isoelectric Point: 6.6476

>NTDB_id=859744 WBG99_RS30130 WP_338899316.1 6871828..6873183(+) (rarA) [Streptomyces sp. TG1A-60]
METDLFTAAAEERQEKDPAASPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGESGGGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIEGARRATGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDLRGLLRRALSDERGLKGAVTLPEDTEAHLLRIAGGDARRALTALEAAAGAALDKRERE
IGLTTLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNSATTAIGAAMEDVRKGLAGPVPPHLRDGHYKGAAKLGHAQGYVY
PHDLPEGIAAQQYAPDAINEREYYTPTRHGAEARYADAVEWTRKHLGRKQS

Nucleotide

• Length: 1356 bp

>NTDB_id=859744 WBG99_RS30130 WP_338899316.1 6871828..6873183(+) (rarA) [Streptomyces sp. TG1A-60]
GTGGAGACCGATCTGTTCACCGCCGCCGCAGAAGAACGCCAGGAGAAGGACCCGGCCGCCAGCCCCCTGGCCGTACGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTGGGCCAGCAGCATCTGCTGAAGCCCGGCTCACCCCTGCGCAGACTGGTCGGCG
AGTCCGGCGGCGGCCCGGCCGGCCCCTCCTCGGTGATCCTCTGGGGCCCGCCCGGCACGGGCAAGACGACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTCTCCGCCATCACCGCCGGCGTCAAGGAGGTCCGCGCGGTCAT
CGAGGGGGCCCGCCGGGCCACCGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCGGCCGTCGAGAACCGCTGGGTCACCCTCATCGCGGCGACCACGGAGAACCCGTACTTC
TCGGTGATCTCCCCCCTGCTCTCCCGCTCCCTGCTCCTCACCCTCGAACCCCTCACCGACGACGACCTGCGCGGCCTGCT
CAGGCGCGCGCTGAGCGACGAGCGCGGTCTCAAGGGCGCCGTCACCCTCCCCGAGGACACCGAGGCCCACCTCCTGCGGA
TCGCCGGCGGCGACGCCCGCCGCGCCCTCACCGCCCTGGAGGCCGCGGCCGGTGCCGCCCTCGACAAGAGGGAGCGGGAG
ATCGGCCTGACGACCCTCGAAGAGACCGTCGACCGCGCCGCCGTGAAGTATGACCGCGACGGCGACCAGCACTACGACGT
GGCCAGCGCACTCATCAAGTCCATCCGCGGCTCGGACGTGGACGCCGCGCTGCACTACCTGGCCCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGCCGACTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGATCCCAACGCACTG
CCCACAGCCGTCGCCGCCGCCCAGGCCGTCGCGATGATCGGCTTCCCCGAGGCCGCACTCACCCTCAGTCACGCCACCAT
CGCCCTCGCCCTGGCCCCGAAGTCGAACTCCGCGACGACGGCCATCGGCGCAGCCATGGAGGACGTACGGAAGGGGCTGG
CCGGGCCCGTGCCGCCGCACCTGCGGGACGGGCACTACAAGGGCGCGGCCAAGCTCGGGCACGCCCAGGGGTATGTGTAC
CCGCACGACCTGCCCGAGGGAATCGCCGCCCAGCAGTACGCCCCGGACGCGATCAACGAGCGGGAGTACTACACACCGAC
CAGGCACGGAGCCGAGGCCCGGTACGCCGACGCGGTGGAGTGGACCAGGAAACATCTCGGTCGGAAGCAGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.794	91.574	0.41