Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   QSG84_RS10070 Genome accession   NZ_CP127893
Coordinates   2156595..2157725 (+) Length   376 a.a.
NCBI ID   WP_317030265.1    Uniprot ID   A0AA97HXG2
Organism   Acinetobacter sp. SAAs470     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2151595..2162725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSG84_RS10055 (QSG84_10050) - 2152961..2155054 (-) 2094 WP_317030262.1 TonB-dependent copper receptor -
  QSG84_RS10060 (QSG84_10055) - 2155127..2155546 (-) 420 WP_317030263.1 DUF2946 domain-containing protein -
  QSG84_RS10065 (QSG84_10060) def 2155631..2156155 (-) 525 WP_317030264.1 peptide deformylase -
  QSG84_RS10070 (QSG84_10065) dprA 2156595..2157725 (+) 1131 WP_317030265.1 DNA-processing protein DprA Machinery gene
  QSG84_RS10075 (QSG84_10070) - 2157767..2158336 (+) 570 WP_317030266.1 L-threonylcarbamoyladenylate synthase -
  QSG84_RS10080 (QSG84_10075) - 2159044..2159937 (-) 894 WP_317030267.1 DMT family transporter -
  QSG84_RS10085 (QSG84_10080) - 2160306..2160851 (+) 546 WP_317032662.1 glutathione peroxidase -
  QSG84_RS10090 (QSG84_10085) - 2161039..2161623 (+) 585 WP_317030268.1 hypothetical protein -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 42399.57 Da        Isoelectric Point: 7.6628

>NTDB_id=845134 QSG84_RS10070 WP_317030265.1 2156595..2157725(+) (dprA) [Acinetobacter sp. SAAs470]
MLEKISTSHLEHIILWYVIQHSVSSFYKLKAYFKTPRQALCKANQTQWQKLGLHKNHLLRLQQLDSPSTQQLLQKIIESI
QQHCDFILTEDDPAYPTQLCPFEDRPPIIFGQGNQQALLQPQIALVGSRKASPYGRQISYDFAYYLSEKGFYITSGLALG
IDSAAHQGGLQHHKTIAIMGTGIEQTYPQQNRTLRAQILQHHGAVITEFLPYSKALPAHFPRRNRLVSGLSLGVIVTEAH
VKSGSLITAKWAAEQGRSIFALPGHIYNASSHGCHQLIRDGAILVDHPEQVIEDLALPTQWHQQNLIASDLNQHAQIPQH
LMAIYNQLDWIGQSLDQLTIQLNIEIAMLTAYLTELELLGLSMQQSGLYLRCRSTQ

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=845134 QSG84_RS10070 WP_317030265.1 2156595..2157725(+) (dprA) [Acinetobacter sp. SAAs470]
ATGTTAGAAAAAATATCCACATCACATCTAGAGCACATTATCTTATGGTATGTTATTCAACACTCTGTATCCAGTTTTTA
TAAACTGAAAGCTTATTTTAAGACACCAAGGCAAGCATTATGTAAAGCAAACCAAACACAATGGCAAAAATTAGGTCTAC
ATAAAAATCATCTACTCAGGTTACAACAGTTAGATTCCCCCTCCACACAACAGTTACTACAAAAAATCATTGAATCTATT
CAACAACATTGTGATTTTATTTTAACAGAAGATGATCCCGCCTATCCGACACAGCTATGCCCCTTTGAAGATCGACCACC
GATTATTTTTGGACAAGGAAATCAACAAGCACTATTACAACCACAAATCGCTTTGGTGGGTAGCCGTAAAGCGAGTCCAT
ATGGTCGACAAATCAGCTATGACTTTGCGTATTATTTAAGTGAAAAAGGCTTTTATATTACCAGTGGTTTAGCATTAGGT
ATTGATAGTGCAGCTCATCAAGGTGGTTTACAACATCATAAAACGATTGCCATTATGGGCACAGGAATTGAACAAACCTA
TCCTCAACAAAATCGTACTTTGCGCGCACAAATTCTGCAACATCATGGCGCAGTCATTACAGAGTTTTTACCTTATAGCA
AAGCACTACCAGCACATTTTCCAAGGCGAAATCGTTTAGTCAGTGGTTTAAGTTTAGGCGTTATTGTCACTGAGGCTCAC
GTAAAAAGTGGTTCATTAATTACAGCAAAATGGGCAGCCGAACAAGGACGCAGTATTTTTGCACTTCCTGGACATATTTA
TAATGCTTCATCTCATGGCTGCCATCAATTAATTCGTGATGGTGCTATTCTTGTCGATCATCCTGAACAGGTGATTGAAG
ATCTCGCCTTACCTACACAATGGCATCAGCAAAATCTTATTGCGTCAGATTTAAACCAACATGCTCAAATACCCCAACAT
TTAATGGCAATTTATAACCAGCTTGATTGGATCGGACAGAGTCTAGATCAATTAACCATACAACTAAATATTGAGATTGC
AATGTTAACCGCATATTTAACTGAACTCGAGTTATTAGGATTATCCATGCAACAATCTGGGCTATATTTACGTTGTCGTT
CTACTCAATAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(87-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baylyi ADP1

58.005

100

0.588
  dprA Acinetobacter baumannii strain A118

57.979

100

0.58
  dprA Acinetobacter baumannii D1279779

57.713

100

0.577