Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   QNH15_RS08410 Genome accession   NZ_CP126109
Coordinates   1566643..1567077 (-) Length   144 a.a.
NCBI ID   WP_283894017.1    Uniprot ID   -
Organism   Fictibacillus enclensis strain TL11     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1561643..1572077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH15_RS08375 (QNH15_08375) - 1561871..1563121 (+) 1251 WP_283894007.1 MFS transporter -
  QNH15_RS08380 (QNH15_08380) - 1563194..1563439 (+) 246 WP_283894009.1 hypothetical protein -
  QNH15_RS08385 (QNH15_08385) - 1563439..1564302 (+) 864 WP_283894011.1 aminoglycoside 6-adenylyltransferase -
  QNH15_RS08390 (QNH15_08390) - 1564352..1565314 (+) 963 WP_283894013.1 aldo/keto reductase -
  QNH15_RS08395 (QNH15_08395) - 1565378..1565893 (+) 516 WP_283894014.1 GNAT family protein -
  QNH15_RS08400 (QNH15_08400) - 1565933..1566121 (-) 189 WP_283894015.1 hypothetical protein -
  QNH15_RS08405 (QNH15_08405) comJ 1566193..1566600 (-) 408 WP_283894016.1 competence protein ComJ -
  QNH15_RS08410 (QNH15_08410) nucA/comI 1566643..1567077 (-) 435 WP_283894017.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QNH15_RS08415 (QNH15_08415) - 1567348..1567854 (+) 507 WP_347343375.1 GNAT family N-acetyltransferase -
  QNH15_RS08420 (QNH15_08420) - 1567877..1568788 (-) 912 WP_283894019.1 DMT family transporter -
  QNH15_RS08425 (QNH15_08425) - 1568932..1569489 (+) 558 WP_283894021.1 GNAT family protein -
  QNH15_RS08430 (QNH15_08430) - 1569678..1571003 (+) 1326 WP_283894023.1 gluconate:H+ symporter -
  QNH15_RS08435 (QNH15_08435) - 1571147..1571641 (+) 495 WP_283894024.1 Lrp/AsnC family transcriptional regulator -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 15741.61 Da        Isoelectric Point: 4.5059

>NTDB_id=836385 QNH15_RS08410 WP_283894017.1 1566643..1567077(-) (nucA/comI) [Fictibacillus enclensis strain TL11]
MKLKALLFSILAACGILSGIDQLPVEKETQSVHAAAAYDQTLYFPLSRYPETGDHIRDAIAAGHPAVCTIDRDGADQRRE
ESLAGYPTKTGYDRDEWPMAMCEEGGYGADIRYISPSDNRGAGAWVGNQVENYPDGTKVLFIVQ

Nucleotide


Download         Length: 435 bp        

>NTDB_id=836385 QNH15_RS08410 WP_283894017.1 1566643..1567077(-) (nucA/comI) [Fictibacillus enclensis strain TL11]
ATGAAACTTAAAGCGTTATTGTTCAGTATTCTTGCCGCATGTGGCATCCTGTCGGGAATTGATCAACTGCCGGTAGAAAA
AGAAACACAGTCCGTACACGCAGCTGCCGCTTATGACCAGACCTTATACTTCCCATTATCACGGTATCCGGAAACTGGGG
ATCACATTCGTGATGCCATTGCTGCGGGCCATCCCGCTGTTTGTACCATTGATCGCGATGGAGCAGACCAGCGAAGAGAA
GAATCACTAGCCGGCTATCCAACAAAAACCGGATACGACCGGGATGAATGGCCAATGGCCATGTGTGAAGAAGGCGGATA
CGGAGCAGACATCCGCTACATCTCTCCTTCTGATAACCGCGGAGCAGGAGCCTGGGTAGGCAATCAAGTGGAAAACTATC
CTGACGGCACAAAGGTTTTGTTTATTGTTCAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

64.348

79.861

0.514