Detailed information NTG0831534

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: QMK51_RS04465
• Genome accession: NZ_CP125375
• Coordinates: 971977..973323 (-)
• Length: 448 a.a.
• NCBI ID: WP_320393268.1
• Uniprot ID: -
• Organism: Pseudomonas sp. P9_31
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 966977..978323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMK51_RS04450 (QMK51_04455)	-	967157..970276 (+)	3120	WP_320393266.1	pilus assembly protein	-
QMK51_RS04455 (QMK51_04460)	-	970290..970691 (+)	402	WP_258699014.1	type IV pilin protein	-
QMK51_RS04460 (QMK51_04465)	thiO	970747..971847 (+)	1101	WP_320393267.1	glycine oxidase ThiO	-
QMK51_RS04465 (QMK51_04470)	pilR	971977..973323 (-)	1347	WP_320393268.1	sigma-54 dependent transcriptional regulator	Regulator
QMK51_RS04470 (QMK51_04475)	pilS	973320..974909 (-)	1590	WP_320394477.1	ATP-binding protein	Regulator
QMK51_RS04475 (QMK51_04480)	-	974899..975132 (-)	234	WP_258699017.1	PP0621 family protein	-
QMK51_RS04480 (QMK51_04485)	-	975269..976285 (-)	1017	WP_320393269.1	outer membrane protein assembly factor BamD	-
QMK51_RS04485 (QMK51_04490)	rluD	976437..977399 (+)	963	WP_007901932.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
QMK51_RS04490 (QMK51_04495)	pgeF	977396..978121 (+)	726	WP_258699019.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 49867.32 Da
• Isoelectric Point: 7.7466

>NTDB_id=831534 QMK51_RS04465 WP_320393268.1 971977..973323(-) (pilR) [Pseudomonas sp. P9_31]
MNTSPRQKILIVDDEPDIRELLEITLGRMKLDTFSARNLAEAQALLARETFDLCLTDMRLPDGTGLALVQHIQQRYAQVP
VAMITAYGSLETAINALKAGAFDFLTKPVDLTRLRELVTSALRLPAPGGASTAIDRRLLGDSLPMRSLRKQIDKLARSQA
PVYISGESGSGKELVARLIHDQGPRATRPFVPVNCGAIPSELMESEFFGHRKGSFSGAIEDKPGLFQAAHGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRSIGGQQETVVDVRILCATHKDLGAEVTAERFRQDLYYRLNVIELRVPPLRERRDDIELLA
SHVLRRLATGTGQPAAKLHPQALDALKSYRFPGNVRELENMLERAHTLCENKQIEASDLRLTEGNCNPDGGVPDLTQIDN
LEAYLENVERKLILQALEETRWNRTAAAQRLNLSFRSMRYRLKKLGLD

Nucleotide

• Length: 1347 bp

>NTDB_id=831534 QMK51_RS04465 WP_320393268.1 971977..973323(-) (pilR) [Pseudomonas sp. P9_31]
TTGAACACGAGCCCACGGCAAAAAATCCTGATCGTCGACGATGAACCCGATATCCGCGAACTCCTGGAAATCACCCTGGG
ACGGATGAAACTCGACACCTTCAGCGCACGCAACCTCGCGGAAGCACAGGCGCTGCTGGCACGGGAGACGTTTGATCTGT
GCCTCACCGACATGCGCCTGCCAGACGGCACAGGCCTGGCGCTGGTGCAGCACATCCAGCAGCGCTATGCGCAAGTGCCG
GTGGCAATGATCACCGCCTACGGCAGCCTGGAGACGGCAATCAACGCTCTCAAGGCGGGCGCCTTCGACTTTCTGACCAA
ACCGGTCGACCTCACCCGCCTGCGCGAACTGGTCACCAGCGCCCTGCGCTTGCCCGCGCCGGGCGGCGCCAGCACCGCCA
TCGATCGGCGCCTGCTGGGCGACTCGCTGCCCATGCGCAGCCTGCGCAAACAAATCGACAAACTGGCCCGCAGCCAGGCC
CCGGTGTACATCAGCGGCGAGTCCGGCAGCGGCAAGGAGTTGGTCGCCCGCCTGATCCATGACCAAGGCCCACGTGCCAC
CCGACCGTTCGTCCCGGTGAACTGTGGAGCGATCCCGTCGGAGTTGATGGAAAGCGAATTTTTCGGCCATCGCAAAGGCA
GTTTCAGCGGCGCCATCGAAGACAAACCCGGACTGTTCCAGGCCGCCCATGGCGGCACATTGTTCCTCGACGAAGTGGCT
GACCTGCCGCTGGCGATGCAGGTCAAACTGCTGCGGGCGATTCAGGAGAAAGCCGTTCGCAGCATCGGTGGGCAGCAAGA
AACCGTGGTCGATGTGCGCATCCTCTGCGCCACCCACAAAGACCTCGGCGCCGAGGTCACCGCCGAACGCTTTCGCCAGG
ATTTGTACTACCGACTCAATGTGATCGAGCTGCGGGTGCCGCCCTTGCGCGAACGCCGCGACGACATTGAGCTCCTGGCC
AGCCATGTACTCAGACGATTGGCGACCGGCACCGGCCAACCCGCCGCAAAACTCCACCCGCAAGCTCTCGATGCACTGAA
AAGCTATCGTTTTCCAGGAAACGTGCGGGAATTGGAGAACATGCTTGAGCGGGCCCACACCTTGTGCGAGAACAAACAGA
TAGAAGCCAGCGACCTGCGACTGACCGAAGGCAACTGTAACCCGGACGGCGGCGTGCCGGACCTGACGCAGATCGACAAC
CTGGAAGCCTATCTGGAAAATGTCGAACGCAAACTCATCCTCCAGGCTCTCGAGGAAACCCGCTGGAATCGCACAGCGGC
GGCTCAGCGGTTGAATTTGTCGTTTCGATCGATGCGTTACAGGCTCAAAAAACTGGGTTTGGATTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (139-304)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Response regulator receiver domain (Response_reg) (9-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	79.233	98.884	0.783
pilR	Acinetobacter baumannii strain A118	49.02	100	0.502