Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | QAY62_RS02560 | Genome accession | NZ_CP123097 |
| Coordinates | 475139..475438 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain MRSA-ATCC43300 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 470139..480438
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAY62_RS02520 (QAY62_02505) | - | 470200..470403 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| QAY62_RS02525 (QAY62_02510) | - | 470400..471386 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| QAY62_RS02530 (QAY62_02515) | - | 471386..471715 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| QAY62_RS02535 (QAY62_02520) | - | 471712..472335 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| QAY62_RS02540 (QAY62_02525) | comGA | 472387..473361 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QAY62_RS02545 (QAY62_02530) | comGB | 473333..474403 (+) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| QAY62_RS02550 (QAY62_02535) | comGC | 474417..474728 (+) | 312 | WP_061843224.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QAY62_RS02555 (QAY62_02540) | comGD | 474706..475152 (+) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| QAY62_RS02560 (QAY62_02545) | comGE | 475139..475438 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| QAY62_RS02565 (QAY62_02550) | comGF | 475356..475853 (+) | 498 | WP_001794328.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| QAY62_RS02570 (QAY62_02555) | - | 475950..476096 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| QAY62_RS02575 (QAY62_02560) | - | 476086..476610 (+) | 525 | WP_001015125.1 | shikimate kinase | - |
| QAY62_RS02580 (QAY62_02565) | gcvT | 476769..477860 (+) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| QAY62_RS02585 (QAY62_02570) | gcvPA | 477880..479226 (+) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=818641 QAY62_RS02560 WP_000844413.1 475139..475438(+) (comGE) [Staphylococcus aureus strain MRSA-ATCC43300]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=818641 QAY62_RS02560 WP_000844413.1 475139..475438(+) (comGE) [Staphylococcus aureus strain MRSA-ATCC43300]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |