Detailed information NTG0807098

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: P5647_RS02015
• Genome accession: NZ_CP120622
• Coordinates: 398639..399787 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain DSM 1090
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 393639..404787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5647_RS01995 (P5647_01995)	yclH	394016..394696 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
P5647_RS02000 (P5647_02000)	yclI	394712..396172 (-)	1461	WP_003234506.1	ABC transporter permease	-
P5647_RS02005 (P5647_02005)	yclJ	396385..397068 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
P5647_RS02010 (P5647_02010)	yclK	397055..398476 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
P5647_RS02015 (P5647_02015)	rapC	398639..399787 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
P5647_RS02020 (P5647_02020)	phrC	399771..399893 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
P5647_RS02025 (P5647_02025)	yczM	399993..400082 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
P5647_RS02030 (P5647_02030)	yczN	400164..400277 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
P5647_RS02035 (P5647_02035)	thrD	400431..401795 (-)	1365	WP_003234493.1	aspartate kinase	-
P5647_RS02040 (P5647_02040)	ceuB	402180..403130 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
P5647_RS02045 (P5647_02045)	yclO	403123..404070 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=807098 P5647_RS02015 WP_003246686.1 398639..399787(+) (rapC) [Bacillus subtilis strain DSM 1090]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=807098 P5647_RS02015 WP_003246686.1 398639..399787(+) (rapC) [Bacillus subtilis strain DSM 1090]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571