Detailed information NTG0799457

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: P2C01_RS12350
• Genome accession: NZ_CP119521
• Coordinates: 2648813..2652205 (+)
• Length: 1130 a.a.
• NCBI ID: WP_275722903.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain C1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2643813..2657205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P2C01_RS12325	erpA	2644172..2644513 (-)	342	WP_014204486.1	iron-sulfur cluster insertion protein ErpA	-
P2C01_RS12330	hemL	2644825..2646117 (+)	1293	WP_004728988.1	glutamate-1-semialdehyde 2,1-aminomutase	-
P2C01_RS12335	-	2646213..2646335 (-)	123	WP_275722900.1	hypothetical protein	-
P2C01_RS12340	-	2646411..2647496 (+)	1086	WP_004728992.1	AI-2E family transporter	-
P2C01_RS12345	rsmC	2647592..2648614 (+)	1023	WP_014204483.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
P2C01_RS12350	chiS	2648813..2652205 (+)	3393	WP_275722903.1	response regulator	Regulator
P2C01_RS12355	-	2652904..2654574 (+)	1671	WP_004728998.1	ABC transporter substrate-binding protein	-
P2C01_RS12360	-	2654739..2655725 (+)	987	WP_004729000.1	ABC transporter permease	-
P2C01_RS12365	-	2655728..2656753 (+)	1026	WP_004729001.1	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 128063.47 Da
• Isoelectric Point: 6.2120

>NTDB_id=799457 P2C01_RS12350 WP_275722903.1 2648813..2652205(+) (chiS) [Vibrio furnissii strain C1]
MFRFNRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVIDYLSAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGVDIDQAREHAQQRYVTGSGDEVKTSVLPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDITGNVVYSIYKRENYGTNLLTGRFKDSNLGQTFRQLEQQVSEHRKTNEDYTPVVLSDFVDEQGRQFAWMGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNTTSSMRTLLVGQDHRSRTLAYDQPEIDKSTQVIDWALNGSRSVGTYTNLDDEK
TIAAYAPINLKDLHWALVVELPEKEAFARIRQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TMINTDRRDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQVIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALTSGANGPINAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIHCTAVNLSNATRLVLELSNHLLGKKQIRI
INQVAEEAPVWVSADAQRLEQVLYNLIGNAIKYTSEGKIVISATRVDQHIRVQVVDTGQGIPAEQLEHIFEPLIQAGHDT
SRYRQGAGLGLSISRQLIELMQGSLYVSSQPMVGTTFSFTLPMASDDEIAQAQLTQQPHFQAPELTELDLPDHHSIPENP
TGPLLLVADDEPVNLRVLDSFLRLEGYRVRTAQDGNEVLQAVAEEKPELLLLDIMMPGMSGYQVCEELRKTYDHAALPVI
MLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLTASKAEQRRLENAELQKELKHRAMVEASLLETQGRLLEQL
ESAPEAIVCIREDNKVRFANDAAARLFKRSQEQLKRSNADELIAQKYLLVEQDHYCGNVDIFIDDTRQHVNADVLRLPKG
AGLQAMYIFNVGGNINAARIHNLETAVEALSSYAFDGDKDKLQQLKELGGEFTRLADKASGDGQSKQELMRSVLVDAMTS
ALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEQGPERTYIEVQR
DKLQKLLTSE

Nucleotide

• Length: 3393 bp

>NTDB_id=799457 P2C01_RS12350 WP_275722903.1 2648813..2652205(+) (chiS) [Vibrio furnissii strain C1]
ATGTTTAGGTTCAATCGGAAGCAAAAGTTTAAGCGCCTGCAAAATACCCTCATGCTCGCGTTCTTGGTTCTTAGCATCAC
CCCATTGACGGTGACGGCGATTTTTTTCCTTCAATCTCACAGTAAAGATCTTCAGGAACAAAGCACATCGCACCTTCTTT
CGGTCCGTGATACGAAGCAACAGCAAGTCATCGACTACCTCAGCGCGAAAGAGTCTGAAGTCATGGGCTTTGTTCGCTCA
GAACTGGCTTACGCCAGTGGTGGGCGTTTCTATGGGTTAGTGAACGCATTTCAACGCTTAGGCGTTGATATCGACCAAGC
ACGAGAGCATGCACAGCAGCGTTACGTCACTGGTTCTGGTGATGAAGTCAAAACCTCCGTGCTACCAGAATCGAGCAGTT
ATGTCGGCAGTGAGCGCTATCGCCTCCTGCACAAACGCTACCATTGGGCCTATCTCGAGCTACTCAAACGGTCCGACTTT
GATGACATCCTGTTGGTCGATATCACCGGCAACGTGGTGTACTCCATCTACAAGCGTGAGAACTACGGCACCAACTTGCT
CACGGGGCGATTCAAAGACAGTAACTTGGGGCAAACCTTCCGCCAGCTGGAACAGCAAGTCAGTGAGCATCGAAAAACCA
ACGAAGATTACACACCAGTGGTGTTGTCGGACTTTGTCGATGAACAAGGCCGTCAATTTGCTTGGATGGGCGCCCCCATT
ATTCAACAAGGCTATCTGCACAGCTACGCCATGTTCCGTTTACCCAACAACGGCATCACCAAGCTGATCGCAGACACCAA
CACCACGTCATCGATGCGCACGTTATTGGTCGGTCAGGATCATCGTTCACGCACGCTGGCTTACGATCAACCGGAAATCG
ATAAAAGTACGCAAGTGATTGATTGGGCGCTCAATGGCAGCCGATCCGTCGGCACGTACACCAACCTTGATGACGAGAAA
ACCATCGCCGCGTACGCGCCGATCAATCTCAAGGATCTGCATTGGGCGTTGGTGGTCGAACTGCCTGAAAAAGAAGCTTT
CGCACGCATTCGTCAACTGGAAAAACTGTTCATCTTCGCGATGCTGACTGCCATTATTTTGGTGGTGATTGCCTCACATT
ACCTATCGAATTTCATCACCTCCCCCCTGCTAAAACTGACATGGGCCGCTGAACGCGTGTCGGCTGGTGATTTAGATGAA
ACCATGATCAACACCGATCGGCGTGATGAAATTGGGCGACTGGCGGTCAGTTTTGAACGCATGCAGCGCTCGATTCGCGA
AAAAATGCAGCTGATTAAGGCGCAGAATAAAGAGCTCGAAAGCAACATTCAGGTCATCCGTAAACAGAATGATGAGTTGC
AACTGGCCAACAAACTCAAAGATGAGTTTCTGGCCACAACATCCCATGAGCTGCGAACCCCACTGCATGGCATGATCGGG
ATTGCCGAAGCACTGACTTCCGGCGCCAATGGCCCAATCAACGCTGCGCATAAGTATCAACTCGACATCATCATCAGCAG
CGGGCAACGTTTGGCCACACTGGTCGATGACCTACTCGATTACCACAAAATGCGTTATGGCAATCTGGATATTCATTGCA
CGGCTGTCAATCTCTCTAATGCCACACGTTTGGTTTTGGAGCTGTCAAATCACCTGTTGGGTAAAAAACAGATTCGCATC
ATCAATCAGGTCGCAGAAGAAGCGCCGGTATGGGTCTCTGCTGATGCGCAGCGTCTTGAGCAAGTGTTGTACAACTTGAT
TGGCAACGCGATCAAATACACCTCCGAAGGCAAGATTGTCATTTCTGCCACTCGCGTTGACCAGCACATTCGCGTGCAAG
TGGTGGATACCGGACAAGGGATTCCGGCAGAGCAATTGGAACATATTTTCGAACCCCTGATTCAAGCCGGGCACGACACC
AGTCGCTACCGCCAAGGGGCCGGACTGGGCCTCTCGATCAGCCGTCAGTTGATCGAGCTGATGCAAGGGTCGCTGTATGT
CAGCAGTCAACCCATGGTCGGAACGACGTTTAGCTTCACACTGCCGATGGCCTCCGACGACGAAATCGCCCAAGCGCAGT
TGACGCAACAACCGCACTTCCAAGCGCCTGAATTGACTGAACTGGATCTGCCAGACCATCACAGCATTCCGGAGAATCCA
ACCGGGCCGTTGCTCTTGGTGGCTGATGATGAGCCGGTGAACTTACGCGTGCTCGATAGCTTCCTGCGTCTTGAAGGCTA
TCGCGTGCGCACCGCTCAGGATGGGAACGAAGTCCTGCAGGCCGTCGCAGAAGAGAAACCTGAATTGTTGCTACTGGACA
TCATGATGCCCGGCATGAGCGGCTATCAGGTGTGTGAAGAGCTGCGTAAAACGTACGATCATGCAGCGTTGCCAGTCATC
ATGCTCACCGCGCTCAATCAATCCGATGACCGAGTGCGCGGCTTTGAAGCCGGCGCCAACGATTATCTATCCAAACCGTT
CAATAAGCAGGAATTAGCCGCACGTATCGTCGCGCACTTGACCGCAAGTAAAGCGGAACAACGTCGCCTTGAGAACGCGG
AACTGCAAAAAGAACTCAAACATCGCGCCATGGTGGAAGCAAGCTTGCTGGAAACACAAGGCCGACTGCTGGAACAGCTG
GAATCCGCGCCAGAAGCGATTGTGTGCATTCGGGAAGACAACAAGGTTCGCTTTGCCAATGACGCCGCAGCGCGCCTGTT
TAAACGCAGTCAGGAACAGCTCAAACGCTCCAACGCTGACGAATTGATTGCGCAAAAATACTTGTTGGTCGAACAGGATC
ACTATTGTGGCAATGTCGACATCTTCATCGACGACACGCGCCAACACGTGAACGCCGATGTCTTGCGCCTCCCCAAAGGC
GCTGGATTACAAGCGATGTATATCTTTAATGTCGGCGGTAACATTAACGCGGCGCGCATCCACAACCTTGAAACGGCGGT
TGAAGCCCTATCAAGTTACGCGTTTGACGGTGACAAAGATAAATTGCAACAGCTCAAAGAGCTGGGCGGTGAATTCACAC
GCTTAGCCGACAAAGCCTCTGGGGACGGCCAATCCAAACAAGAGTTGATGCGTTCTGTGCTGGTCGATGCCATGACCTCC
GCCCTCAACTACTGGGAAAGAGTCTCCGGTCAAAGCAAGTTCACCTTTGCTGAACAAAGTGGGCTGTGGCGCGTCTACCT
CGATCGCAGTACGCTGCAAACTCGAACACTCGACAAATACCTGCGTATCGAAACACTGCCTAAAACGCCGCGCTGGCGCA
CCGTGCTTAACTCGTTAGATTACATTCTGGATCACTGCCAGGAACAAGGACCAGAACGCACTTACATTGAAGTGCAACGG
GATAAGTTACAAAAGCTACTGACGTCAGAATAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (575-683)

• PAS fold (PAS) (877-923)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	84.159	100	0.842