Detailed information NTG0790872

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: PTA87_RS07180
• Genome accession: NZ_CP118163
• Coordinates: 1444438..1445412 (+)
• Length: 324 a.a.
• NCBI ID: WP_257070565.1
• Uniprot ID: -
• Organism: Staphylococcus hyicus strain SG-7
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1439438..1450412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PTA87_RS07145	rpmG	1439970..1440134 (+)	165	WP_257053265.1	50S ribosomal protein L33	-
PTA87_RS07150	-	1440247..1440786 (+)	540	WP_039645567.1	5-formyltetrahydrofolate cyclo-ligase	-
PTA87_RS07155	-	1440804..1442243 (+)	1440	WP_274311709.1	rhomboid family intramembrane serine protease	-
PTA87_RS07160	-	1442245..1442448 (+)	204	WP_039645571.1	YqgQ family protein	-
PTA87_RS07165	-	1442445..1443431 (+)	987	WP_039645573.1	ROK family glucokinase	-
PTA87_RS07170	-	1443433..1443744 (+)	312	WP_039645576.1	MTH1187 family thiamine-binding protein	-
PTA87_RS07175	-	1443759..1444382 (+)	624	WP_107632997.1	MBL fold metallo-hydrolase	-
PTA87_RS07180	comGA	1444438..1445412 (+)	975	WP_257070565.1	competence type IV pilus ATPase ComGA	Machinery gene
PTA87_RS07185	comGB	1445381..1446448 (+)	1068	WP_119635812.1	competence type IV pilus assembly protein ComGB	-
PTA87_RS07190	comGC	1446460..1446780 (+)	321	WP_107632995.1	competence type IV pilus major pilin ComGC	Machinery gene
PTA87_RS07195	comGD	1446770..1447201 (+)	432	WP_209260663.1	competence type IV pilus minor pilin ComGD	-
PTA87_RS07200	-	1447394..1447876 (+)	483	WP_039645587.1	competence type IV pilus minor pilin ComGF	-
PTA87_RS07205	-	1447860..1448057 (+)	198	WP_039645590.1	hypothetical protein	-
PTA87_RS07210	-	1448035..1448565 (+)	531	WP_107632993.1	shikimate kinase	-
PTA87_RS07215	gcvT	1448720..1449811 (+)	1092	WP_107632992.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37003.84 Da
• Isoelectric Point: 7.2046

>NTDB_id=790872 PTA87_RS07180 WP_257070565.1 1444438..1445412(+) (comGA) [Staphylococcus hyicus strain SG-7]
MQLLIDHVVQYAITHEASDIHFIPNSSQVDVKLRIKDYLKPYDTLNLETYQKMLTLLKFKAGLDVSSRHKAQSGRYIYEY
ETLYYLRVSTLPLNLGNESCVIRITPQLFHTDINQTAYDIQKTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKDVIQASLSGHLVLSTIHANDCKGVLL
RLIEMGITKQDLLQALNLIVNQRLITTNDNSRKLVYELMSQDDIRYFLDHNFVLPKHFESLNDKLTELKKKGEIDDVTLR
KYQK

Nucleotide

• Length: 975 bp

>NTDB_id=790872 PTA87_RS07180 WP_257070565.1 1444438..1445412(+) (comGA) [Staphylococcus hyicus strain SG-7]
ATGCAATTATTAATTGACCATGTCGTACAATATGCCATAACACATGAAGCGTCGGACATTCATTTTATTCCGAATTCATC
ACAAGTCGATGTAAAGCTAAGAATTAAAGATTATTTAAAACCTTATGACACATTAAATTTAGAGACGTATCAAAAAATGT
TAACATTATTAAAATTCAAAGCTGGACTTGATGTATCTTCTAGACATAAAGCACAAAGTGGGCGTTATATCTACGAATAT
GAGACATTATATTATTTACGTGTTTCAACACTACCATTAAATTTAGGCAATGAAAGCTGTGTCATTCGCATTACCCCGCA
ATTGTTTCACACTGATATTAATCAAACCGCTTATGACATACAAAAAACCATGGAAAAGAAACAAGGATTAATATTATTTA
GTGGTCCAACAGGTGCAGGCAAAAGTACATTAATGTATCAAATGGTGGTATACGCTAAAGAAAAACTCAACTTAAATATC
ATTACAATAGAAGATCCAGTCGAACAATTGCTAAATGGAGTAACACAAATATCTGTAAATGAAAAAGCTGATATTACTTA
TGGAAATTCATTAAAAGCAATATTACGGTGTGATCCAGATGTAATTTTAATTGGTGAAATAAGAGATGGTTTAATTGCAA
AAGATGTCATTCAAGCAAGTTTGAGTGGCCATTTAGTTTTATCGACTATACACGCAAATGATTGCAAAGGCGTATTATTA
CGCCTTATTGAAATGGGAATTACGAAACAAGATTTATTACAAGCACTTAATCTTATAGTAAATCAGCGTTTAATTACGAC
AAATGACAATTCAAGGAAACTCGTTTATGAACTAATGTCTCAAGATGATATACGGTACTTTTTGGACCATAATTTTGTAC
TACCTAAACACTTTGAAAGTCTTAATGACAAACTGACTGAGCTAAAAAAGAAAGGAGAGATAGATGACGTCACATTACGA
AAATATCAAAAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.204	99.691	0.58
comGA	Staphylococcus aureus N315	58.204	99.691	0.58