Detailed information NTG0790088

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: MGCS35922_RS01990
• Genome accession: NZ_CP118097
• Coordinates: 367123..368049 (+)
• Length: 308 a.a.
• NCBI ID: WP_084916649.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 362123..373049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS35922_RS01975 (MGCS35922_00804)	pbp3	362195..363211 (-)	1017	Protein_336	D-alanyl-D-alanine carboxypeptidase PBP3	-
MGCS35922_RS01980 (MGCS35922_00806)	amiA	363585..365555 (+)	1971	WP_042357846.1	peptide ABC transporter substrate-binding protein	Regulator
MGCS35922_RS01985 (MGCS35922_00808)	amiC	365621..367123 (+)	1503	WP_003057826.1	ABC transporter permease	Regulator
MGCS35922_RS01990 (MGCS35922_00810)	amiD	367123..368049 (+)	927	WP_084916649.1	oligopeptide ABC transporter permease OppC	Regulator
MGCS35922_RS01995 (MGCS35922_00812)	amiE	368058..369128 (+)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
MGCS35922_RS02000 (MGCS35922_00814)	amiF	369121..370044 (+)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator
MGCS35922_RS02005 (MGCS35922_00816)	-	370071..371111 (-)	1041	Protein_342	IS30 family transposase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34872.93 Da
• Isoelectric Point: 9.2260

>NTDB_id=790088 MGCS35922_RS01990 WP_084916649.1 367123..368049(+) (amiD) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922]
METIDKSKFRFVERDSRASEVIDTPAYSYWKSVFRQFFSKKSTIFMLMILVTILLMSFIYPMFANYDFGDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINVTIGVILGAIWGVSKAFDKVMIEIYNVISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRFRDLEYNLASQTLGTPMYKIAIKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRLIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=790088 MGCS35922_RS01990 WP_084916649.1 367123..368049(+) (amiD) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35922]
ATGGAAACGATTGATAAATCAAAATTTCGATTTGTTGAGCGCGATAGCAGAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTATTGGAAATCCGTATTCCGTCAATTTTTCTCTAAAAAGTCTACTATCTTCATGCTAATGATTTTAGTGACCATCT
TATTGATGAGTTTTATTTACCCAATGTTTGCGAATTATGACTTTGGTGATGTGAGTAATATCAACGATTTCTCGAAACGT
TATATTTGGCCCAACGCCGAATACTGGTTTGGAACAGATAAAAACGGACAATCTTTGTTTGATGGTGTTTGGTATGGAGC
GCGTAATTCTATCTTAATTTCTGTTATAGCAACATTGATTAATGTGACTATCGGAGTTATTTTAGGAGCTATTTGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAGATTTATAATGTCATCTCAAACATTCCTTCAATGTTAATTATTATTGTT
TTGACCTATTCATTAGGTGCTGGTTTTTGGAATTTGATTTTAGCTTTCTGTATCACTGGATGGATCGGTGTAGCTTACTC
TATCCGTGTGCAAATCTTACGTTTCCGTGATTTGGAGTACAACCTTGCTAGCCAAACCCTAGGAACACCAATGTACAAAA
TTGCCATTAAGAACCTCTTGCCTCAATTGGTTTCAGTTATCATGACCATGTTGTCACAAATGTTACCAGTGTACGTGTCT
TCTGAGGCTTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACGACTCCAAGCTTAGGGCGTTTGATTGCTAATTATTC
TAGCAACTTAACAACAAATGCTTACCTCTTCTGGATTCCCTTAGTAACGTTGATTTTAGTATCATTACCATTGTATATTG
TCGGACAAAACCTGGCAGATGCCAGCGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	72.727	100	0.727
amiD	Streptococcus thermophilus LMG 18311	72.727	100	0.727
amiD	Streptococcus thermophilus LMD-9	72.727	100	0.727