NTDB

Overview

Name	coiA	Type	Machinery gene
Locus tag	PUW77_RS04935	Genome accession	NZ_CP118079
Coordinates	931344..932291 (+)	Length	315 a.a.
NCBI ID	WP_000903642.1	Uniprot ID	A0AAV3JK20
Organism	Streptococcus agalactiae strain VSI15
Function	homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 926344..937291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUW77_RS04910 (PUW77_04910)	-	926693..927373 (+)	681	WP_000656582.1	VIT family protein	-
PUW77_RS04915 (PUW77_04915)	-	927524..928225 (+)	702	WP_079219429.1	glucosamine-6-phosphate deaminase	-
PUW77_RS04920 (PUW77_04920)	-	928297..929253 (-)	957	WP_000523788.1	glutathione S-transferase C-terminal domain-containing protein	-
PUW77_RS04925 (PUW77_04925)	-	929349..930068 (+)	720	WP_001234956.1	pseudouridine synthase	-
PUW77_RS04930 (PUW77_04930)	-	930141..931292 (+)	1152	WP_274982475.1	MFS transporter	-
PUW77_RS04935 (PUW77_04935)	coiA	931344..932291 (+)	948	WP_000903642.1	competence protein CoiA family protein	Machinery gene
PUW77_RS04940 (PUW77_04940)	pepF	932307..934112 (+)	1806	WP_079219431.1	oligoendopeptidase F	Regulator
PUW77_RS04945 (PUW77_04945)	-	934307..934933 (+)	627	WP_000736935.1	HAD hydrolase-like protein	-
PUW77_RS04950 (PUW77_04950)	-	935007..935714 (+)	708	WP_000250853.1	O-methyltransferase	-
PUW77_RS04955 (PUW77_04955)	prsA	935775..936704 (+)	930	WP_000857822.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

Download Length: 315 a.a. Molecular weight: 37807.57 Da Isoelectric Point: 9.5842

                                >NTDB_id=789903 PUW77_RS04935 WP_000903642.1 931344..932291(+) (coiA) [Streptococcus agalactiae strain VSI15]

MLIAKDKQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFAHISLKNCQFYHENESNEHLQLKAKLYMSLSRENE

TMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERTKAYLQADFQVRWLLGEKLWLKHRLTNLHKQFLQFSQSIGF

HIWELDLRLEVLRLKYLIYEDLRGHVYYLSKTCPLSGDVLAFLKWPYQSKNLNFYKVKQDRNIRDYVRQQLRYGNQFWLR

KQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLDQTLYPPVFYDKIVTKN

Nucleotide

Download Length: 948 bp

                                >NTDB_id=789903 PUW77_RS04935 WP_000903642.1 931344..932291(+) (coiA) [Streptococcus agalactiae strain VSI15]

ATGTTAATTGCTAAAGACAAACAAGGAAATTTAATTAATCTACTCGAGTCTCATCCGGGAAAGGGACAGTATTTTTGTCC

AACTTGTTGTTCAGCTGTAAGGTTAAAGGCAGGTCGAATCATGAGAAGACACTTTGCACATATTAGTCTAAAAAATTGTC

AGTTTTATCATGAAAATGAGTCTAATGAGCACTTGCAATTAAAAGCAAAGTTATATATGAGTTTAAGTAGAGAGAATGAA

ACTATGCTCGAGCATCATTTGCCAGAAATTAATCAGATTGCAGATTTATTTGTGAATGAGACATTGGCTTTAGAAGTTCA

GTGTAGCCGACTATCAGAGCAGCGACTCAGGGAACGAACAAAAGCATATCTACAGGCAGACTTTCAAGTGAGATGGTTAC

TAGGGGAAAAACTCTGGTTAAAGCATCGTTTAACAAATCTACATAAACAATTTTTACAATTTTCTCAAAGTATCGGATTT

CATATTTGGGAGTTAGATTTGAGGTTAGAAGTACTGAGACTAAAATATTTGATTTACGAAGATTTACGCGGACATGTCTA

TTACTTAAGTAAAACTTGCCCTCTTAGTGGAGACGTTCTAGCATTTTTGAAGTGGCCATACCAATCAAAAAATCTAAATT

TTTATAAGGTTAAACAAGACAGAAATATCAGAGATTATGTGCGTCAGCAGTTACGCTATGGCAATCAATTTTGGTTACGA

AAACAAGAAAAGGCCTACCTTTCTGGTCAGAATCTATTGACCCAAGAGCTAATGATGTTTTTTCCTCAAATACAGCCACC

ACGTGTAGATACTGATTTTTGTCAAATAACAAATTCTCTAACATCGTTTTATCAGAATTTTACAAATTATTATCAAAAAA

ATAAGAATAACTTAGACCAAACACTTTATCCCCCTGTATTTTATGATAAAATAGTCACTAAGAATTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-299)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
coiA	Streptococcus pneumoniae TIGR4	49.051	100	0.492
coiA	Streptococcus pneumoniae Rx1	49.051	100	0.492
coiA	Streptococcus pneumoniae D39	49.051	100	0.492
coiA	Streptococcus pneumoniae R6	49.051	100	0.492
coiA	Streptococcus mitis NCTC 12261	49.051	100	0.492
coiA	Lactococcus lactis subsp. cremoris KW2	40.062	100	0.41

Detailed information NTG0789903