Detailed information NTG0788988

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: PUN50_RS24530
• Genome accession: NZ_CP117989
• Coordinates: 1737609..1738706 (-)
• Length: 365 a.a.
• NCBI ID: WP_038889042.1
• Uniprot ID: A0A812H8E7
• Organism: Vibrio campbellii strain 20220413_1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1732609..1743706

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUN50_RS24510 (PUN50_24510)	-	1732630..1733085 (-)	456	WP_045420825.1	Lrp/AsnC family transcriptional regulator	-
PUN50_RS24515 (PUN50_24515)	-	1733235..1734161 (+)	927	WP_274291530.1	DMT family transporter	-
PUN50_RS24520 (PUN50_24520)	-	1734255..1734917 (+)	663	WP_045382063.1	PilZ domain-containing protein	-
PUN50_RS24525 (PUN50_24525)	luxQ	1735030..1737609 (-)	2580	WP_274291531.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
PUN50_RS24530 (PUN50_24530)	luxP	1737609..1738706 (-)	1098	WP_038889042.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
PUN50_RS24535 (PUN50_24535)	-	1739104..1739418 (-)	315	WP_005433435.1	GIY-YIG nuclease family protein	-
PUN50_RS24540 (PUN50_24540)	-	1739415..1740068 (-)	654	WP_274291532.1	YceH family protein	-
PUN50_RS24545 (PUN50_24545)	-	1740162..1740365 (-)	204	WP_274291533.1	hypothetical protein	-
PUN50_RS24550 (PUN50_24550)	-	1740604..1740918 (+)	315	WP_005373603.1	DUF496 family protein	-
PUN50_RS24555 (PUN50_24555)	-	1741042..1742379 (+)	1338	WP_045382071.1	MATE family efflux transporter	-
PUN50_RS24560 (PUN50_24560)	-	1742473..1743462 (-)	990	WP_045420369.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41451.79 Da
• Isoelectric Point: 5.4779

>NTDB_id=788988 PUN50_RS24530 WP_038889042.1 1737609..1738706(-) (luxP) [Vibrio campbellii strain 20220413_1]
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=788988 PUN50_RS24530 WP_038889042.1 1737609..1738706(-) (luxP) [Vibrio campbellii strain 20220413_1]
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACCAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGTCCGCTTAAAATATCAGTGGTTTACCCAGGGCAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGCTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCACTAATGGAAGCGCTTAAGAGTAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAATACCAAATTGATCTTGCAAAATATT
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
GGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGACG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
TGTGGCATTGGGTGCAGTAGACGCACTTGCCGAGTTGGGACGTGAAGACATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGATACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-322)

3D structure

• AlphaFold DB: A0A812H8E7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	63.462	99.726	0.633