Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   OS091_RS11285 Genome accession   NZ_CP113037
Coordinates   2224018..2225004 (-) Length   328 a.a.
NCBI ID   WP_000959296.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Zilean     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2219018..2230004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS091_RS11260 - 2219278..2219625 (-) 348 WP_001242107.1 hypothetical protein -
  OS091_RS11265 - 2219811..2220404 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  OS091_RS11270 - 2220508..2220873 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  OS091_RS11275 yjbH 2220896..2221702 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  OS091_RS11280 pepF 2222162..2223970 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  OS091_RS11285 coiA 2224018..2225004 (-) 987 WP_000959296.1 competence protein CoiA Machinery gene
  OS091_RS11290 mecA 2225125..2225844 (-) 720 WP_001217728.1 adaptor protein MecA -
  OS091_RS11295 spxA 2226215..2226610 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  OS091_RS11300 trpS 2226905..2227894 (+) 990 WP_000448937.1 tryptophan--tRNA ligase -
  OS091_RS11305 - 2227920..2229566 (-) 1647 WP_000277724.1 IS1182-like element ISSau3 family transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38779.29 Da        Isoelectric Point: 9.6529

>NTDB_id=759342 OS091_RS11285 WP_000959296.1 2224018..2225004(-) (coiA) [Staphylococcus aureus strain Zilean]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQFLQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLESDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=759342 OS091_RS11285 WP_000959296.1 2224018..2225004(-) (coiA) [Staphylococcus aureus strain Zilean]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGTTTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGAAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

96.341

100

0.963
  coiA Staphylococcus aureus N315

96.341

100

0.963