Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   OL235_RS07165 Genome accession   NZ_CP110237
Coordinates   1539493..1540779 (-) Length   428 a.a.
NCBI ID   WP_275468565.1    Uniprot ID   A0AAF0I556
Organism   Vagococcus intermedius strain STAA25     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1534493..1545779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OL235_RS07160 (OL235_07160) - 1537736..1539451 (-) 1716 WP_275468564.1 proline--tRNA ligase -
  OL235_RS07165 (OL235_07165) eeP 1539493..1540779 (-) 1287 WP_275468565.1 RIP metalloprotease RseP Regulator
  OL235_RS07170 (OL235_07170) - 1541059..1541865 (-) 807 WP_275468566.1 phosphatidate cytidylyltransferase -
  OL235_RS07175 (OL235_07175) - 1541869..1542696 (-) 828 WP_275468567.1 isoprenyl transferase -
  OL235_RS07180 (OL235_07180) frr 1542884..1543441 (-) 558 WP_275468568.1 ribosome recycling factor -
  OL235_RS07185 (OL235_07185) pyrH 1543443..1544165 (-) 723 WP_275468569.1 UMP kinase -
  OL235_RS07190 (OL235_07190) tsf 1544298..1545176 (-) 879 WP_275468570.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 47188.65 Da        Isoelectric Point: 8.0486

>NTDB_id=753327 OL235_RS07165 WP_275468565.1 1539493..1540779(-) (eeP) [Vagococcus intermedius strain STAA25]
MKTVLTFLFVFCVIVIVHELGHFIFAKRSGILVREFAIGMGPKIFAHTGKDGTTYTIRLLPIGGYVRMAGMGEEEVELTP
GQPIAVELNDKQKIVRINTSSKIQLSNAIPLEVTQFDLEKELIIKGHAYGNDKEVITYEVEHDAMIIESDGTEVRIAPLD
VQFQSAKLYKRALTNFAGPLFNFILTFIIFTIVLFIQGGNVEPDPTSKVGAVVENGVAADAGIKPNDRIIEVAGKRVTTF
EEIGPILTKNVDKSVKVKVERDGKEKTVTLTPRAEKQEDGSKRVMMGIMGGTKVTSLSFIEKLKEAGTKTIVNATVIFVA
LKDLILGFSLNKLGGPVMIFQVSSQVANEGIITILNFMAMLSVNLGIMNLLPIPALDGGKLLLNFVEAIRRKPLSEESEG
KITMIGFAFMMILMVLVTWNDIMRFFFR

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=753327 OL235_RS07165 WP_275468565.1 1539493..1540779(-) (eeP) [Vagococcus intermedius strain STAA25]
ATGAAAACAGTGCTGACCTTTTTATTTGTGTTCTGTGTGATTGTCATCGTTCATGAATTAGGTCATTTTATTTTTGCTAA
GCGTTCAGGTATTTTAGTGAGAGAATTCGCAATCGGCATGGGTCCGAAAATCTTTGCTCATACAGGGAAAGACGGGACGA
CTTATACCATTAGGTTGTTACCAATAGGTGGTTATGTCCGGATGGCTGGTATGGGTGAAGAGGAAGTTGAGTTAACACCT
GGTCAACCTATTGCCGTTGAACTTAATGATAAACAAAAAATTGTTAGAATTAACACAAGTAGTAAAATACAGCTATCGAA
CGCGATCCCTTTAGAAGTGACGCAATTTGATTTGGAGAAAGAATTAATAATTAAAGGACATGCTTATGGTAATGATAAAG
AAGTTATTACCTATGAAGTAGAACATGATGCCATGATTATTGAATCAGATGGAACAGAAGTTAGAATAGCTCCGTTAGAT
GTCCAATTCCAGTCAGCTAAATTATATAAAAGAGCCTTAACTAATTTTGCCGGACCGTTATTCAACTTCATCTTAACGTT
TATTATTTTTACTATTGTGTTATTCATACAAGGTGGTAATGTTGAACCAGATCCAACTAGTAAGGTTGGTGCTGTTGTTG
AAAATGGTGTAGCTGCCGATGCAGGTATTAAACCAAATGATCGCATTATTGAGGTGGCAGGTAAGCGAGTTACTACTTTT
GAAGAAATCGGGCCAATTCTAACTAAAAATGTAGATAAATCTGTCAAAGTAAAAGTAGAACGTGATGGTAAAGAGAAGAC
TGTCACATTAACACCTAGAGCTGAAAAACAAGAAGATGGTAGCAAACGTGTTATGATGGGGATTATGGGTGGGACTAAGG
TTACATCACTTTCTTTCATTGAGAAGTTAAAAGAAGCAGGAACCAAAACAATTGTTAATGCAACAGTAATTTTCGTTGCA
TTAAAAGATTTAATTTTAGGGTTTAGTTTAAATAAATTAGGTGGCCCAGTGATGATCTTCCAAGTTTCCTCACAAGTAGC
AAATGAGGGAATTATTACGATCTTAAACTTTATGGCCATGCTTAGTGTTAATTTAGGAATAATGAATTTATTACCAATTC
CTGCATTGGATGGTGGTAAATTACTATTAAATTTTGTTGAAGCAATTCGTAGGAAACCCTTATCAGAAGAGAGCGAAGGA
AAAATCACGATGATTGGTTTTGCTTTTATGATGATATTGATGGTGTTGGTAACATGGAACGATATTATGCGTTTCTTTTT
TAGATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(209-261)

Peptidase family M50 (Peptidase_M50)

(6-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

50.346

100

0.509
  eeP Streptococcus thermophilus LMG 18311

50.346

100

0.509