Detailed information NTG0703348

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NHG71_RS13655
• Genome accession: NZ_CP100040
• Coordinates: 2782195..2783343 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2777195..2788343

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NHG71_RS13625 (NHG71_13605)	-	2777331..2778089 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
NHG71_RS13630 (NHG71_13610)	-	2778083..2779030 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
NHG71_RS13635 (NHG71_13615)	ceuB	2779020..2779973 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
NHG71_RS13640 (NHG71_13620)	-	2780387..2781751 (+)	1365	WP_007609394.1	aspartate kinase	-
NHG71_RS13645 (NHG71_13625)	-	2781846..2781941 (+)	96	WP_021495118.1	YjcZ family sporulation protein	-
NHG71_RS13650 (NHG71_13630)	phrC	2782092..2782211 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NHG71_RS13655 (NHG71_13635)	rapC	2782195..2783343 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
NHG71_RS13660 (NHG71_13640)	-	2783496..2784929 (-)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
NHG71_RS13665 (NHG71_13645)	-	2784916..2785599 (-)	684	WP_032872879.1	response regulator transcription factor	-
NHG71_RS13670 (NHG71_13650)	-	2785812..2787242 (+)	1431	WP_032872876.1	ABC transporter permease	-
NHG71_RS13675 (NHG71_13655)	-	2787257..2787940 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=703348 NHG71_RS13655 WP_007410270.1 2782195..2783343(-) (rapC) [Bacillus velezensis strain B1]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=703348 NHG71_RS13655 WP_007410270.1 2782195..2783343(-) (rapC) [Bacillus velezensis strain B1]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568