Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   MUA13_RS04970 Genome accession   NZ_CP094787
Coordinates   1023855..1024409 (-) Length   184 a.a.
NCBI ID   WP_237760656.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6168     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1018855..1029409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA13_RS04950 (MUA13_04945) - 1020360..1021718 (+) 1359 WP_000021870.1 TrkH family potassium uptake protein -
  MUA13_RS04955 (MUA13_04950) - 1021857..1023368 (+) 1512 WP_000414184.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  MUA13_RS04970 (MUA13_04965) comK/comK1 1023855..1024409 (-) 555 WP_237760656.1 competence protein ComK Regulator
  MUA13_RS04975 (MUA13_04970) - 1024634..1024852 (+) 219 WP_000876826.1 IDEAL domain-containing protein -
  MUA13_RS04980 (MUA13_04975) - 1024933..1025919 (-) 987 WP_000668823.1 lipoate--protein ligase -
  MUA13_RS04985 (MUA13_04980) - 1026118..1026294 (+) 177 WP_000214898.1 YkvS family protein -
  MUA13_RS04990 (MUA13_04985) - 1026309..1026911 (+) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  MUA13_RS04995 (MUA13_04990) - 1027228..1027290 (+) 63 WP_228764722.1 hypothetical protein -
  MUA13_RS05000 (MUA13_04995) - 1027460..1027561 (+) 102 WP_031763719.1 hypothetical protein -
  MUA13_RS05005 (MUA13_05000) - 1027571..1027843 (+) 273 WP_001797239.1 lactococcin 972 family bacteriocin -

Sequence

Protein


Download         Length: 184 a.a.        Molecular weight: 21996.18 Da        Isoelectric Point: 9.6407

>NTDB_id=672539 MUA13_RS04970 WP_237760656.1 1023855..1024409(-) (comK/comK1) [Staphylococcus aureus strain IVB6168]
MYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPILLTPLF
PTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKNPDQ
PIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 555 bp        

>NTDB_id=672539 MUA13_RS04970 WP_237760656.1 1023855..1024409(-) (comK/comK1) [Staphylococcus aureus strain IVB6168]
ATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAACGGTAGTGAAATAAT
TCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCAAATTTTATGGTAATA
CTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTACTAACACCATTATTT
CCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTATATCGAAAGTATTAA
AGAATTAAAAAATCGCAAATGTAAAGTAACATTTATTAATAATGAATCAATCATTCTTCATGTTTCATACCACAGTTTAT
GGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCAAAAAATCCCGACCAA
CCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGAAGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

99.457

100

0.995
  comK/comK1 Staphylococcus aureus N315

99.457

100

0.995