Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGE   Type   Machinery gene
Locus tag   MUA35_RS07705 Genome accession   NZ_CP094770
Coordinates   1582738..1583037 (-) Length   99 a.a.
NCBI ID   WP_000844413.1    Uniprot ID   X5E258
Organism   Staphylococcus aureus strain IVB6201     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1577738..1588037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA35_RS07680 (MUA35_07655) gcvPA 1578950..1580296 (-) 1347 WP_115305438.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA -
  MUA35_RS07685 (MUA35_07660) gcvT 1580316..1581407 (-) 1092 WP_262538681.1 glycine cleavage system aminomethyltransferase GcvT -
  MUA35_RS07690 (MUA35_07665) - 1581566..1582090 (-) 525 WP_001015120.1 shikimate kinase -
  MUA35_RS07695 (MUA35_07670) - 1582080..1582226 (-) 147 WP_001789879.1 hypothetical protein -
  MUA35_RS07700 (MUA35_07675) comGF 1582323..1582820 (-) 498 WP_262607516.1 competence type IV pilus minor pilin ComGF Machinery gene
  MUA35_RS07705 (MUA35_07680) comGE 1582738..1583037 (-) 300 WP_000844413.1 hypothetical protein Machinery gene
  MUA35_RS07710 (MUA35_07685) comGD 1583024..1583470 (-) 447 WP_001796473.1 competence type IV pilus minor pilin ComGD Machinery gene
  MUA35_RS07715 (MUA35_07690) comGC 1583448..1583759 (-) 312 WP_262538680.1 competence type IV pilus major pilin ComGC Machinery gene
  MUA35_RS07720 (MUA35_07695) comGB 1583773..1584843 (-) 1071 WP_262538679.1 competence type IV pilus assembly protein ComGB Machinery gene
  MUA35_RS07725 (MUA35_07700) comGA 1584815..1585789 (-) 975 WP_000697220.1 competence type IV pilus ATPase ComGA Machinery gene
  MUA35_RS07730 (MUA35_07705) - 1585841..1586464 (-) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  MUA35_RS07735 (MUA35_07710) - 1586461..1586790 (-) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  MUA35_RS07740 (MUA35_07715) - 1586790..1587776 (-) 987 WP_000161315.1 ROK family glucokinase -
  MUA35_RS07745 (MUA35_07720) - 1587773..1587976 (-) 204 WP_000087561.1 YqgQ family protein -

Sequence


Protein


Download         Length: 99 a.a.        Molecular weight: 11093.20 Da        Isoelectric Point: 9.9215

>NTDB_id=672209 MUA35_RS07705 WP_000844413.1 1582738..1583037(-) (comGE) [Staphylococcus aureus strain IVB6201]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY

Nucleotide


Download         Length: 300 bp        

>NTDB_id=672209 MUA35_RS07705 WP_000844413.1 1582738..1583037(-) (comGE) [Staphylococcus aureus strain IVB6201]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB X5E258

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Staphylococcus aureus MW2

86.842

100

1

  comGE Staphylococcus aureus N315

98.99

100

0.99