Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   MUA94_RS09080 Genome accession   NZ_CP094768
Coordinates   1812197..1812766 (+) Length   189 a.a.
NCBI ID   WP_262537038.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6202     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1807197..1817766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA94_RS09045 (MUA94_09025) - 1808414..1808701 (-) 288 WP_000478236.1 lactococcin 972 family bacteriocin -
  MUA94_RS09050 (MUA94_09030) - 1808693..1808791 (-) 99 Protein_1752 hypothetical protein -
  MUA94_RS13920 - 1809330..1809407 (-) 78 WP_099112139.1 putative holin-like toxin -
  MUA94_RS09060 (MUA94_09040) - 1809710..1810312 (-) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  MUA94_RS09065 (MUA94_09045) - 1810327..1810503 (-) 177 WP_000214898.1 YkvS family protein -
  MUA94_RS09070 (MUA94_09050) - 1810702..1811688 (+) 987 WP_000668817.1 lipoate--protein ligase -
  MUA94_RS09075 (MUA94_09055) - 1811769..1811987 (-) 219 WP_262537037.1 IDEAL domain-containing protein -
  MUA94_RS09080 (MUA94_09060) comK/comK1 1812197..1812766 (+) 570 WP_262537038.1 competence protein ComK Regulator
  MUA94_RS09095 (MUA94_09075) - 1813255..1814766 (-) 1512 WP_000414178.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  MUA94_RS09100 (MUA94_09080) - 1814905..1816263 (-) 1359 WP_000021871.1 TrkH family potassium uptake protein -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22613.88 Da        Isoelectric Point: 9.6091

>NTDB_id=672178 MUA94_RS09080 WP_262537038.1 1812197..1812766(+) (comK/comK1) [Staphylococcus aureus strain IVB6202]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPIYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=672178 MUA94_RS09080 WP_262537038.1 1812197..1812766(+) (comK/comK1) [Staphylococcus aureus strain IVB6202]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGCGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAATTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(5-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

99.471

100

0.995
  comK/comK1 Staphylococcus aureus N315

99.471

100

0.995