Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA92_RS07780 Genome accession   NZ_CP094721
Coordinates   1560673..1561719 (-) Length   348 a.a.
NCBI ID   WP_262559176.1    Uniprot ID   -
Organism   Staphylococcus sp. IVB6227     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1555673..1566719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA92_RS07750 (MUA92_07750) - 1556603..1556809 (-) 207 WP_262559166.1 DUF1128 domain-containing protein -
  MUA92_RS07755 (MUA92_07755) - 1557047..1557508 (+) 462 WP_262559167.1 low molecular weight protein-tyrosine-phosphatase -
  MUA92_RS07760 (MUA92_07760) - 1557508..1557798 (+) 291 WP_262559168.1 YtxH domain-containing protein -
  MUA92_RS07765 (MUA92_07765) - 1558004..1559281 (+) 1278 WP_262615412.1 YihY/virulence factor BrkB family protein -
  MUA92_RS07770 (MUA92_07770) - 1559430..1559999 (+) 570 WP_262559172.1 carbonic anhydrase -
  MUA92_RS07775 (MUA92_07775) vraR 1560054..1560683 (-) 630 WP_262559174.1 response regulator transcription factor Regulator
  MUA92_RS07780 (MUA92_07780) vraS 1560673..1561719 (-) 1047 WP_262559176.1 sensor histidine kinase Regulator
  MUA92_RS07785 (MUA92_07785) liaF 1561716..1562420 (-) 705 WP_262559177.1 cell wall-active antibiotics response protein LiaF -
  MUA92_RS07790 (MUA92_07790) - 1562433..1562822 (-) 390 WP_262559178.1 hypothetical protein -
  MUA92_RS07795 (MUA92_07795) map 1562921..1563682 (-) 762 WP_262559179.1 type I methionyl aminopeptidase -
  MUA92_RS07800 (MUA92_07800) - 1563777..1564775 (+) 999 WP_262559180.1 aromatic acid exporter family protein -
  MUA92_RS07805 (MUA92_07805) - 1564825..1565550 (-) 726 WP_262559181.1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40202.53 Da        Isoelectric Point: 5.4392

>NTDB_id=671244 MUA92_RS07780 WP_262559176.1 1560673..1561719(-) (vraS) [Staphylococcus sp. IVB6227]
MNHYIRTIGSMLILVYAMFTVFFFIDKVFVNIIFFQGMLYKQIFGISVFLFINLVVVFFCILVGSVIAYKINQQYDWLQE
QIERAIQGETVGINDHQIELYNETIGLYQTLVPLNQELHKLRIKTQNLTNEQYNMNDLKVKKIIEDERQRLARELHDSVS
QQLFAASLMLSAIKETELEPPLDQQIPTLEKMIQESQLEMRALLLHLRPIGLKDKTLGEGIKSLVTDLQRKVPMKVMYDI
DTFEVPKGIEDHLFRITQEAISNTLRHANGTQVSVELLNRDGHLLLRIQDDGIGFNPDEKMEQSYGLKNMRERATEIGAT
FHIVSLPNAGTRIEVKAPLDKEGQQYDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=671244 MUA92_RS07780 WP_262559176.1 1560673..1561719(-) (vraS) [Staphylococcus sp. IVB6227]
ATGAATCATTATATCCGAACGATTGGCTCTATGTTGATATTGGTTTATGCGATGTTCACTGTGTTTTTCTTCATTGATAA
GGTATTTGTCAATATTATCTTTTTTCAAGGTATGTTGTATAAACAGATATTTGGGATTTCAGTTTTTTTATTTATCAACT
TAGTTGTTGTATTTTTTTGTATTCTCGTTGGCAGTGTCATTGCATATAAAATCAATCAGCAATACGATTGGTTACAAGAA
CAAATCGAACGTGCAATACAAGGAGAGACAGTGGGGATTAATGATCATCAAATTGAACTATACAATGAAACAATTGGACT
TTATCAAACATTAGTGCCATTGAATCAAGAGTTGCATAAATTAAGAATTAAAACACAGAATTTAACAAATGAACAGTACA
ATATGAATGACTTAAAGGTGAAAAAGATTATAGAAGATGAACGACAACGTCTAGCACGTGAGCTACATGACAGTGTATCT
CAACAGCTGTTTGCGGCAAGTTTAATGTTATCTGCGATTAAAGAGACAGAACTTGAGCCACCTTTAGATCAACAGATTCC
AACATTGGAGAAAATGATTCAAGAATCACAACTTGAGATGCGTGCATTGCTACTACACTTACGACCAATTGGTTTGAAGG
ACAAGACACTGGGAGAAGGTATTAAGTCGTTAGTGACAGATTTACAGCGCAAAGTGCCGATGAAAGTGATGTATGACATC
GATACGTTTGAAGTGCCAAAAGGGATTGAAGATCATCTATTTCGTATTACACAAGAAGCGATTTCTAATACATTAAGACA
TGCTAATGGGACACAAGTCAGTGTAGAGTTGTTGAATCGTGATGGTCATCTTCTGTTGCGTATACAAGATGACGGCATCG
GATTTAACCCAGATGAAAAGATGGAACAGAGTTATGGATTGAAAAATATGAGAGAGCGTGCGACAGAGATTGGTGCAACG
TTCCATATCGTATCATTACCGAATGCAGGAACGCGTATTGAGGTAAAAGCACCATTAGATAAGGAGGGTCAGCAGTATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

80.172

100

0.802