Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   MTO68_RS09640 Genome accession   NZ_CP094620
Coordinates   2077110..2077820 (-) Length   236 a.a.
NCBI ID   WP_004721139.1    Uniprot ID   A0A077KYT9
Organism   Acinetobacter sp. NyZ410     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2072110..2082820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO68_RS09620 (MTO68_09620) - 2073502..2074293 (+) 792 WP_004820958.1 M48 family metallopeptidase -
  MTO68_RS09625 (MTO68_09625) - 2074434..2074739 (+) 306 WP_239045800.1 hypothetical protein -
  MTO68_RS09630 (MTO68_09630) - 2074851..2075636 (+) 786 WP_004721143.1 M48 family metallopeptidase -
  MTO68_RS09635 (MTO68_09635) - 2075731..2076780 (-) 1050 WP_244015742.1 NADP(H)-dependent aldo-keto reductase -
  MTO68_RS09640 (MTO68_09640) crp 2077110..2077820 (-) 711 WP_004721139.1 cAMP-activated global transcriptional regulator CRP Regulator
  MTO68_RS09645 (MTO68_09645) - 2077972..2078394 (+) 423 WP_004721138.1 OsmC family protein -
  MTO68_RS09650 (MTO68_09650) - 2078579..2079391 (-) 813 WP_244015743.1 peptidoglycan DD-metalloendopeptidase family protein -
  MTO68_RS09655 (MTO68_09655) - 2079625..2081592 (-) 1968 WP_244015744.1 family 2A encapsulin nanocompartment cargo protein cysteine desulfurase -
  MTO68_RS09660 (MTO68_09660) - 2081567..2082499 (-) 933 WP_004721119.1 family 2A encapsulin nanocompartment shell protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26563.18 Da        Isoelectric Point: 4.6726

>NTDB_id=670229 MTO68_RS09640 WP_004721139.1 2077110..2077820(-) (crp) [Acinetobacter sp. NyZ410]
MSSNFAQLSTDALSPGQLPESVKALLKRAHINRFPKRSTIIDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEQNPQRTAEVRTRDVCEIAEISYDNFHEISKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDVSLEESNFSEDELSTDDE

Nucleotide


Download         Length: 711 bp        

>NTDB_id=670229 MTO68_RS09640 WP_004721139.1 2077110..2077820(-) (crp) [Acinetobacter sp. NyZ410]
ATGTCTTCTAATTTTGCACAACTTAGTACAGATGCTTTGTCTCCTGGTCAACTACCTGAGTCAGTCAAAGCTTTGCTCAA
AAGAGCCCACATCAATCGTTTTCCAAAACGCTCAACGATTATTGATGCAGGTTCAGAGTCAAAATCACTGTATTTAATTT
TAAAAGGTTCAGTTTCAATTATTTTACGTGAAGATGATGAGCGTGAAATTGTTGTTGCATATTTGAACCCTGGGGACTTT
TTCGGGGAAATGGGATTATTTGAGCAAAATCCACAACGTACTGCGGAAGTAAGAACCCGTGACGTATGTGAAATTGCTGA
AATTTCATATGATAATTTCCACGAAATTAGTAAACAATATCCTGACTTAAGTTATGCTGTATTTGCACAACTTGTTCGTC
GTTTAAAAAATACAACACGCAAAGTAACTGACCTTGCATTTATTGATGTATCTGGTCGTATTGCGCGTTGTTTAATTGAT
CTTTCAGCACAGCCTGAAGCGATGATCTTGCCAAACGGCCGTCAAATCCGCATTACTCGCCAAGAAATTGGTCGTATCGT
GGGTTGTTCCCGTGAAATGGTTGGTCGTGTTCTAAAAACACTTGAAGAACAAGGCATGATCGAAACCGACGGTAAAGCCA
TCCTTATATTTGATGTATCTTTGGAAGAATCTAATTTTTCTGAAGACGAACTAAGCACAGATGATGAATAA

Domains

Predicted by InterproScan.

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-219)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077KYT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.304

97.458

0.89
  crp Vibrio cholerae strain A1552

48.293

86.864

0.419
  crp Haemophilus influenzae Rd KW20

48.705

81.78

0.398