Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG61_RS07205 | Genome accession | NZ_CP094148 |
| Coordinates | 1501657..1501920 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584955.1 | Uniprot ID | K7YLH7 |
| Organism | Helicobacter pylori strain Hpfe024 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1496657..1506920
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG61_RS07190 (MPG61_07190) | - | 1497633..1498973 (-) | 1341 | WP_245020391.1 | hypothetical protein | - |
| MPG61_RS07200 (MPG61_07200) | comB4 | 1499292..1501655 (-) | 2364 | WP_245020392.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG61_RS07205 (MPG61_07205) | comB3 | 1501657..1501920 (-) | 264 | WP_000584955.1 | hypothetical protein | Machinery gene |
| MPG61_RS07210 (MPG61_07210) | comB2 | 1501920..1502201 (-) | 282 | WP_245020393.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG61_RS07215 (MPG61_07215) | - | 1502346..1503173 (-) | 828 | WP_001154890.1 | DUF5718 family protein | - |
| MPG61_RS07220 (MPG61_07220) | - | 1503263..1504315 (-) | 1053 | WP_245020394.1 | MnmA/TRMU family protein | - |
| MPG61_RS07225 (MPG61_07225) | dnaG | 1504312..1505991 (-) | 1680 | WP_245020395.1 | DNA primase | - |
| MPG61_RS07230 (MPG61_07230) | groES | 1506266..1506622 (+) | 357 | WP_000671947.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10048.12 Da Isoelectric Point: 9.5507
>NTDB_id=667627 MPG61_RS07205 WP_000584955.1 1501657..1501920(-) (comB3) [Helicobacter pylori strain Hpfe024]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667627 MPG61_RS07205 WP_000584955.1 1501657..1501920(-) (comB3) [Helicobacter pylori strain Hpfe024]
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGCGCCTTTTATTTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGCGCCTTTTATTTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
97.701 |
100 |
0.977 |