Detailed information NTG0066751

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: SAJPND4_RS07550
• Genome accession: NZ_AP014653
• Coordinates: 1560331..1560828 (-)
• Length: 165 a.a.
• NCBI ID: WP_020978197.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain TMUS2134
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1555331..1565828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAJPND4_RS07525 (SAJPND4_01488)	gcvPB	1555493..1556965 (-)	1473	WP_000202188.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
SAJPND4_RS07530 (SAJPND4_01489)	gcvPA	1556958..1558304 (-)	1347	WP_000019681.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
SAJPND4_RS07535 (SAJPND4_01490)	gcvT	1558324..1559415 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
SAJPND4_RS07540 (SAJPND4_01491)	-	1559574..1560098 (-)	525	WP_001015121.1	shikimate kinase	-
SAJPND4_RS07545 (SAJPND4_01492)	-	1560088..1560234 (-)	147	WP_001789879.1	hypothetical protein	-
SAJPND4_RS07550 (SAJPND4_01493)	comGF	1560331..1560828 (-)	498	WP_020978197.1	competence type IV pilus minor pilin ComGF	Machinery gene
SAJPND4_RS07555 (SAJPND4_01494)	comGE	1560746..1561045 (-)	300	WP_000844410.1	hypothetical protein	Machinery gene
SAJPND4_RS07560 (SAJPND4_01495)	comGD	1561032..1561478 (-)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
SAJPND4_RS07565 (SAJPND4_01496)	comGC	1561456..1561767 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
SAJPND4_RS07570 (SAJPND4_01497)	comGB	1561781..1562851 (-)	1071	WP_000776401.1	competence type IV pilus assembly protein ComGB	Machinery gene
SAJPND4_RS07575 (SAJPND4_01498)	comGA	1562823..1563797 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
SAJPND4_RS07580 (SAJPND4_01499)	-	1563849..1564472 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
SAJPND4_RS07585 (SAJPND4_01500)	-	1564469..1564798 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
SAJPND4_RS07590 (SAJPND4_01501)	-	1564798..1565784 (-)	987	WP_000161314.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19158.95 Da
• Isoelectric Point: 10.1964

>NTDB_id=66751 SAJPND4_RS07550 WP_020978197.1 1560331..1560828(-) (comGF) [Staphylococcus aureus strain TMUS2134]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISIILLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDKNDIEIRQQRIILQKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=66751 SAJPND4_RS07550 WP_020978197.1 1560331..1560828(-) (comGF) [Staphylococcus aureus strain TMUS2134]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTTATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAATTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGTGTAGATAAAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACAGAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

• Putative Competence protein ComGF (ComGF) (69-155)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus N315	98.788	100	0.988
comGF	Staphylococcus aureus MW2	96.364	100	0.964