Detailed information NTG0657302

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MJO57_RS25100
• Genome accession: NZ_CP092417
• Coordinates: 5625068..5626132 (-)
• Length: 354 a.a.
• NCBI ID: WP_252019679.1
• Uniprot ID: -
• Organism: Endozoicomonas sp. SCSIO W0465
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5620068..5631132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MJO57_RS25075 (MJO57_24970)	aroK	5620385..5620906 (-)	522	WP_252019669.1	shikimate kinase AroK	-
MJO57_RS25080 (MJO57_24975)	pilQ	5621094..5623118 (-)	2025	WP_252019670.1	type IV pilus secretin PilQ	Machinery gene
MJO57_RS25085 (MJO57_24980)	-	5623364..5623900 (-)	537	WP_252019673.1	pilus assembly protein PilP	-
MJO57_RS25090 (MJO57_24985)	-	5623897..5624508 (-)	612	WP_252019674.1	type 4a pilus biogenesis protein PilO	-
MJO57_RS25095 (MJO57_24990)	-	5624505..5625068 (-)	564	WP_252019677.1	PilN domain-containing protein	-
MJO57_RS25100 (MJO57_24995)	comM	5625068..5626132 (-)	1065	WP_252019679.1	pilus assembly protein PilM	Machinery gene
MJO57_RS25105 (MJO57_25000)	-	5626431..5628914 (+)	2484	WP_252019680.1	penicillin-binding protein 1A	-
MJO57_RS25110 (MJO57_25005)	-	5629067..5629945 (+)	879	WP_252019681.1	LysR family transcriptional regulator	-
MJO57_RS25115 (MJO57_25010)	-	5629987..5630466 (-)	480	WP_256492266.1	nucleoside deaminase	-
MJO57_RS25120 (MJO57_25015)	-	5630497..5630664 (-)	168	WP_252019686.1	hypothetical protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38300.54 Da
• Isoelectric Point: 4.2750

>NTDB_id=657302 MJO57_RS25100 WP_252019679.1 5625068..5626132(-) (comM) [Endozoicomonas sp. SCSIO W0465]
MFGLLKKKSSAVLGVDISSTSVKVLELGLRGSGYRVEAFGVVPLPPGAVVENNIHEVDVIGEAISRALSQSRSGLKNAAV
AVSGSAVITKTIDMDASLSEDEMETQITVEADQYIPYAMDEVAIDFEVQGLNEKNPERVEVLLAACRRDNVEMREEALRL
GGVTARVVDVEAFAMERACELIEDQLDLPDQDPVLAVVDIGATKTTLNVISRGKTVYTREQLFGGRQLTDEIQRRYGLTP
EEAEKAKCKGGLPDDYEPEVLEPFRETVVQQVSRSLQFFYSSSQFNDVDAIALVGGSASIPDMAEMIQDKLGVPTRLANP
FAGMSMAGKVDTDQLASKAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=657302 MJO57_RS25100 WP_252019679.1 5625068..5626132(-) (comM) [Endozoicomonas sp. SCSIO W0465]
GTGTTTGGGCTGCTGAAAAAAAAATCAAGTGCCGTTTTAGGGGTGGATATAAGCTCGACATCTGTCAAGGTCCTTGAATT
AGGGCTGAGGGGCAGCGGTTACCGAGTCGAAGCTTTCGGTGTTGTGCCCCTTCCGCCGGGGGCTGTTGTCGAAAATAATA
TCCATGAAGTCGATGTCATCGGTGAAGCTATATCAAGGGCTCTCTCCCAATCAAGATCAGGCCTGAAAAACGCTGCAGTG
GCTGTATCAGGATCTGCCGTCATTACCAAAACCATTGATATGGATGCTTCCCTCAGTGAAGATGAGATGGAAACCCAGAT
CACTGTTGAGGCAGACCAGTACATCCCCTACGCCATGGATGAAGTGGCTATTGATTTTGAAGTTCAGGGCCTGAACGAGA
AAAACCCCGAGCGGGTTGAAGTTTTGCTGGCGGCCTGTCGTCGTGACAATGTTGAAATGCGCGAGGAGGCACTTCGGCTT
GGGGGAGTAACTGCCAGGGTCGTTGATGTAGAAGCCTTTGCCATGGAGCGGGCATGCGAGTTAATTGAAGACCAGCTTGA
CCTGCCAGATCAGGATCCGGTGCTTGCAGTCGTCGATATTGGCGCCACGAAAACCACACTGAATGTGATCAGTCGGGGTA
AAACCGTATATACCCGTGAGCAGCTGTTCGGTGGACGTCAGCTGACTGATGAAATTCAGCGCCGCTACGGGCTCACCCCT
GAAGAAGCGGAAAAAGCCAAGTGTAAGGGGGGGCTGCCTGATGATTATGAACCAGAAGTTCTGGAACCATTTCGGGAAAC
GGTGGTTCAGCAGGTATCACGCTCACTGCAATTCTTTTATTCCTCCAGCCAGTTCAATGATGTAGATGCTATTGCGCTGG
TAGGAGGCTCCGCATCAATCCCAGATATGGCGGAAATGATTCAGGATAAACTGGGGGTTCCGACCAGACTGGCAAACCCT
TTTGCCGGAATGTCCATGGCTGGGAAAGTGGATACCGACCAACTGGCCAGTAAGGCACCATCTCTGATGATTGCCTGCGG
CCTTGCCATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	51.695	100	0.517
pilM	Acinetobacter baumannii D1279779	51.412	100	0.514
comM	Acinetobacter baylyi ADP1	48.87	100	0.489
pilM	Legionella pneumophila strain ERS1305867	43.503	100	0.435