Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LU294_RS07490 Genome accession   NZ_CP089743
Coordinates   1413625..1414083 (-) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus paranthracis strain SHOU-BC01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1408625..1419083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LU294_RS07465 (LU294_07465) - 1408823..1410364 (-) 1542 WP_109630122.1 MDR family MFS transporter -
  LU294_RS07470 (LU294_07470) - 1410790..1411290 (+) 501 WP_000708168.1 hypothetical protein -
  LU294_RS07475 (LU294_07475) - 1411230..1411475 (-) 246 Protein_1466 hypothetical protein -
  LU294_RS07480 (LU294_07480) - 1411640..1412281 (+) 642 WP_000680835.1 diguanylate cyclase domain-containing protein -
  LU294_RS07485 (LU294_07485) - 1412931..1413593 (+) 663 WP_000922491.1 YkyA family protein -
  LU294_RS07490 (LU294_07490) kre 1413625..1414083 (-) 459 WP_000804868.1 YkyB family protein Regulator
  LU294_RS07495 (LU294_07495) ppx 1414262..1415800 (+) 1539 WP_000658870.1 exopolyphosphatase -
  LU294_RS07500 (LU294_07500) - 1415909..1418017 (+) 2109 WP_000423563.1 polyphosphate kinase -
  LU294_RS07505 (LU294_07505) - 1418191..1418427 (-) 237 WP_000283743.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=638439 LU294_RS07490 WP_000804868.1 1413625..1414083(-) (kre) [Bacillus paranthracis strain SHOU-BC01]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=638439 LU294_RS07490 WP_000804868.1 1413625..1414083(-) (kre) [Bacillus paranthracis strain SHOU-BC01]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAGAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493