Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LPC11_RS01285 Genome accession   NZ_CP088218
Coordinates   284146..285042 (+) Length   298 a.a.
NCBI ID   WP_023374225.1    Uniprot ID   A0A2J6P620
Organism   Staphylococcus sp. HL28     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 279146..290042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPC11_RS01260 (LPC11_01260) - 279749..281221 (+) 1473 WP_114599525.1 poly-gamma-glutamate hydrolase family protein -
  LPC11_RS01265 (LPC11_01265) - 281401..281502 (+) 102 WP_015364644.1 SE2200 family small protein -
  LPC11_RS01270 (LPC11_01270) - 281585..283039 (-) 1455 WP_023374228.1 alkaline phosphatase -
  LPC11_RS01275 (LPC11_01275) - 283295..283453 (+) 159 WP_164967141.1 hypothetical protein -
  LPC11_RS01280 (LPC11_01280) braR 283475..284140 (+) 666 WP_107566263.1 response regulator transcription factor Regulator
  LPC11_RS01285 (LPC11_01285) braS 284146..285042 (+) 897 WP_023374225.1 sensor histidine kinase Regulator
  LPC11_RS01290 (LPC11_01290) - 285146..285892 (+) 747 WP_023374224.1 ABC transporter ATP-binding protein -
  LPC11_RS01295 (LPC11_01295) - 285910..287904 (+) 1995 WP_231307311.1 ABC transporter permease -
  LPC11_RS01300 (LPC11_01300) - 288027..288869 (+) 843 WP_023374222.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34436.96 Da        Isoelectric Point: 6.1600

>NTDB_id=633306 LPC11_RS01285 WP_023374225.1 284146..285042(+) (braS) [Staphylococcus sp. HL28]
MLLTFIKSIKNEIAIVTFISLLFVLIFFVFSLPKSALILGLAIILFIMCIYWWISYLGFQKQERLKEKVVSLEEELFEMK
NKQIEYRKDVESYFLTWVHQIKTPITASQLLLERNEPNVANQVRQEIVQIENYTRLALSYLKLLNEASDMTITEVSLDDL
IKPLIMKYRIHFIEQHTKIHYQSIDDSILTDAQWTSILIEQILNNALKYARGKDIWIDFDSSSHQLFIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHIAQHLNLNVEVTSELNKGTQFTISFPTQS

Nucleotide


Download         Length: 897 bp        

>NTDB_id=633306 LPC11_RS01285 WP_023374225.1 284146..285042(+) (braS) [Staphylococcus sp. HL28]
ATGTTACTAACGTTTATTAAATCAATTAAAAATGAAATAGCGATTGTTACCTTTATATCCTTACTGTTTGTACTCATTTT
CTTTGTGTTTTCACTCCCCAAAAGTGCGTTGATTCTTGGGTTAGCAATTATTTTATTTATTATGTGTATTTATTGGTGGA
TCAGTTATTTAGGTTTTCAAAAACAAGAAAGACTTAAAGAAAAAGTAGTATCACTCGAAGAAGAACTATTTGAAATGAAG
AACAAACAAATTGAATATCGTAAAGATGTTGAAAGTTATTTCTTAACATGGGTACATCAAATCAAAACGCCAATCACTGC
ATCGCAACTATTGCTAGAACGTAATGAACCTAATGTTGCTAATCAAGTGAGACAAGAAATTGTACAAATTGAAAATTATA
CTCGCCTAGCGCTAAGTTACTTAAAATTACTTAATGAAGCCTCCGATATGACAATCACAGAGGTTAGCCTAGATGATTTA
ATCAAACCCTTAATCATGAAATATCGAATTCACTTTATTGAACAACATACTAAAATTCATTATCAATCTATAGATGATAG
TATCTTAACAGATGCACAATGGACTTCGATATTGATAGAACAGATACTGAATAACGCCTTAAAGTACGCACGTGGAAAAG
ATATTTGGATTGACTTTGACTCAAGTTCTCACCAATTATTTATTAAAGATAATGGTATTGGTATTAGTCAAGCAGACTTG
CCGAAAATCTTTGACAAAGGATATTCTGGTTACAATGGTAGCCTCAATGAATCCTCTAGTGGTATTGGATTGTTTATCGT
TAAACATATTGCGCAACATCTGAATTTAAATGTTGAAGTAACATCAGAATTAAATAAAGGTACACAATTTACAATTAGCT
TTCCAACGCAAAGCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(198-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J6P620

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

61.356

98.993

0.607