Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   LQ044_RS12760 Genome accession   NZ_CP088200
Coordinates   2582231..2583529 (+) Length   432 a.a.
NCBI ID   WP_010783616.1    Uniprot ID   -
Organism   Enterococcus faecalis strain S39-4     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2577231..2588529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LQ044_RS12735 (LQ044_12735) - 2577717..2578028 (-) 312 Protein_2486 sigma-70 family RNA polymerase sigma factor -
  LQ044_RS12740 (LQ044_12740) gst 2578118..2578627 (-) 510 WP_002381118.1 DinB family glutathione transferase -
  LQ044_RS12745 (LQ044_12745) - 2578960..2580363 (+) 1404 WP_002383291.1 dicarboxylate/amino acid:cation symporter -
  LQ044_RS12750 (LQ044_12750) - 2580461..2581303 (-) 843 WP_002381116.1 hypothetical protein -
  LQ044_RS12755 (LQ044_12755) rlmH 2581351..2581830 (-) 480 WP_002355021.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LQ044_RS12760 (LQ044_12760) htrA 2582231..2583529 (+) 1299 WP_010783616.1 trypsin-like peptidase domain-containing protein Regulator
  LQ044_RS12765 (LQ044_12765) ytpR 2583576..2584196 (-) 621 WP_002361057.1 YtpR family tRNA-binding protein -
  LQ044_RS12770 (LQ044_12770) - 2584407..2584862 (-) 456 WP_002385249.1 universal stress protein -
  LQ044_RS12775 (LQ044_12775) - 2585010..2585324 (-) 315 WP_002355015.1 thioredoxin family protein -
  LQ044_RS12780 (LQ044_12780) pepA 2585336..2586412 (-) 1077 WP_002355013.1 glutamyl aminopeptidase -
  LQ044_RS12785 (LQ044_12785) - 2586719..2587060 (+) 342 WP_002381114.1 PepSY domain-containing protein -

Sequence

Protein


Download         Length: 432 a.a.        Molecular weight: 44859.02 Da        Isoelectric Point: 5.1187

>NTDB_id=633259 LQ044_RS12760 WP_010783616.1 2582231..2583529(+) (htrA) [Enterococcus faecalis strain S39-4]
MQRKDVTPNSDKKSLLQKFGIGLAGGLLGGALILGGAYSGIIPTPNGGNNVATTTSTNHGDTKVSNVSYNVSSDVTKAVK
KVQNSVVSVINMQSASNNSSADDPFGGLFGGNEGTQDSSGNNGNDLEAASEGSGVIYKKDGKTAYVVTNNHVVDKAQGLE
VVLSDGTKVKGELVGTDAYTDLAVIKISSDKVNQVAEFGNSSKITVGEPAIAIGSPLGSDYANSVTQGIISSVNRNITNK
NESGETININAIQTDAAINPGNSGGPLINIEGQVIGINSVKIVQSTSQVSVEGMGFAIPSNDVVNIINQLEKDGKVTRPA
LGITMSDLTGISSQQQEQILKIPASVKTGVVVRGVEAATPAEKAGLEKYDVITKVDGQDVSSTTDLQSALYKKKVGDKME
VTYYRGSKEMKATIDLTIDKSALTQQNNRSNQ

Nucleotide


Download         Length: 1299 bp        

>NTDB_id=633259 LQ044_RS12760 WP_010783616.1 2582231..2583529(+) (htrA) [Enterococcus faecalis strain S39-4]
ATGCAACGAAAAGATGTTACACCTAATTCAGATAAAAAAAGTTTATTGCAAAAATTTGGGATTGGTTTAGCTGGCGGCTT
ACTTGGTGGCGCCCTTATTCTAGGAGGCGCTTATTCTGGGATTATTCCCACACCCAACGGCGGAAATAATGTGGCGACGA
CGACGTCCACTAATCACGGCGACACAAAAGTCAGCAATGTGAGTTACAATGTTTCTAGCGATGTCACAAAAGCCGTGAAA
AAAGTTCAAAATTCTGTGGTTTCTGTCATTAATATGCAAAGTGCTAGCAACAATTCTTCGGCAGATGATCCTTTTGGGGG
ATTGTTCGGTGGGAATGAAGGTACTCAAGACTCTTCCGGCAACAATGGTAACGATTTAGAAGCAGCCAGTGAAGGTAGTG
GGGTTATTTATAAGAAAGATGGTAAAACGGCTTATGTCGTGACAAATAACCACGTCGTAGATAAAGCGCAAGGATTGGAA
GTTGTTTTATCTGATGGTACCAAAGTGAAAGGCGAATTAGTCGGAACCGATGCTTACACGGATTTAGCCGTGATTAAAAT
TTCTTCTGACAAAGTTAATCAAGTCGCTGAGTTTGGGAATTCTAGTAAAATCACAGTCGGTGAGCCTGCTATTGCAATTG
GTTCCCCGCTAGGTTCTGATTATGCTAACTCTGTCACACAAGGAATCATCTCTTCTGTGAATAGAAATATTACCAATAAA
AATGAATCCGGTGAAACTATCAATATTAATGCCATTCAAACCGATGCTGCCATCAATCCAGGAAACTCTGGTGGTCCACT
AATCAATATTGAAGGACAAGTCATTGGCATTAACTCAGTAAAAATTGTGCAATCAACTAGTCAAGTGAGCGTTGAAGGGA
TGGGCTTTGCCATTCCAAGTAATGACGTAGTCAACATTATCAACCAATTAGAAAAAGATGGTAAAGTGACACGACCAGCT
CTTGGGATTACGATGTCTGATTTAACAGGTATCTCTTCACAACAACAAGAACAAATTTTAAAAATTCCAGCTTCTGTAAA
AACTGGCGTAGTGGTTCGTGGTGTTGAAGCAGCGACCCCTGCTGAAAAGGCTGGATTGGAAAAATACGATGTTATCACGA
AAGTTGACGGCCAAGACGTAAGCTCTACTACAGATTTACAAAGCGCGCTTTACAAGAAAAAAGTTGGCGACAAAATGGAA
GTGACTTATTATCGTGGTTCTAAAGAAATGAAAGCAACCATCGATTTAACCATTGATAAATCAGCTTTAACACAACAAAA
TAATCGCAGCAATCAATAA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(132-277)

PDZ domain (PDZ_2)

(319-416)

Peptidase family M50 (Peptidase_M50)

(9-416)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

53.171

94.907

0.505
  htrA Streptococcus mutans UA159

58.63

84.491

0.495
  htrA Streptococcus mitis NCTC 12261

55.135

85.648

0.472
  htrA Streptococcus pneumoniae TIGR4

55.807

81.713

0.456
  htrA Streptococcus pneumoniae Rx1

55.807

81.713

0.456
  htrA Streptococcus pneumoniae D39

55.807

81.713

0.456
  htrA Streptococcus pneumoniae R6

55.807

81.713

0.456