Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LK336_RS02270 | Genome accession | NZ_CP086572 |
| Coordinates | 435457..435756 (+) | Length | 99 a.a. |
| NCBI ID | WP_031787259.1 | Uniprot ID | A0A7U7PYR8 |
| Organism | Staphylococcus argenteus strain RIVM_M036020 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 430457..440756
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK336_RS02230 (LK336_02230) | - | 430517..430717 (+) | 201 | WP_000087563.1 | YqgQ family protein | - |
| LK336_RS02235 (LK336_02235) | - | 430717..431703 (+) | 987 | WP_000161316.1 | ROK family glucokinase | - |
| LK336_RS02240 (LK336_02240) | - | 431703..432032 (+) | 330 | WP_001018874.1 | MTH1187 family thiamine-binding protein | - |
| LK336_RS02245 (LK336_02245) | - | 432029..432652 (+) | 624 | WP_031787263.1 | MBL fold metallo-hydrolase | - |
| LK336_RS02250 (LK336_02250) | comGA | 432704..433678 (+) | 975 | WP_031787262.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LK336_RS02255 (LK336_02255) | comGB | 433650..434720 (+) | 1071 | WP_031787261.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LK336_RS02260 (LK336_02260) | comGC | 434735..435046 (+) | 312 | WP_000921699.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LK336_RS02265 (LK336_02265) | comGD | 435024..435470 (+) | 447 | WP_072324131.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LK336_RS02270 (LK336_02270) | comGE | 435457..435756 (+) | 300 | WP_031787259.1 | hypothetical protein | Machinery gene |
| LK336_RS02275 (LK336_02275) | comGF | 435716..436171 (+) | 456 | WP_078097699.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LK336_RS02280 (LK336_02280) | - | 436270..436419 (+) | 150 | WP_072324192.1 | hypothetical protein | - |
| LK336_RS02285 (LK336_02285) | - | 436406..436930 (+) | 525 | WP_031787256.1 | shikimate kinase | - |
| LK336_RS02290 (LK336_02290) | gcvT | 437087..438178 (+) | 1092 | WP_000093342.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| LK336_RS02295 (LK336_02295) | gcvPA | 438197..439543 (+) | 1347 | WP_031787255.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11192.35 Da Isoelectric Point: 9.4577
>NTDB_id=625531 LK336_RS02270 WP_031787259.1 435457..435756(+) (comGE) [Staphylococcus argenteus strain RIVM_M036020]
MKNYKLKASFFLDSMAAVMLVGLICLVLIPIMNQMRMNFYIEVKSIDASKTILTAASTNSKNELKKGVKIGEYVIKLDDK
QICAITNENSSKFKECIQY
MKNYKLKASFFLDSMAAVMLVGLICLVLIPIMNQMRMNFYIEVKSIDASKTILTAASTNSKNELKKGVKIGEYVIKLDDK
QICAITNENSSKFKECIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=625531 LK336_RS02270 WP_031787259.1 435457..435756(+) (comGE) [Staphylococcus argenteus strain RIVM_M036020]
ATGAAAAATTATAAGCTCAAAGCATCATTCTTTTTAGATAGCATGGCAGCAGTTATGTTAGTAGGATTAATCTGTTTAGT
TTTAATACCAATAATGAATCAAATGCGTATGAATTTCTATATTGAAGTAAAAAGTATAGATGCATCAAAGACTATTCTAA
CTGCGGCTTCCACAAATAGTAAAAATGAGCTTAAAAAAGGAGTTAAAATTGGAGAATATGTTATTAAGTTGGATGATAAG
CAAATTTGTGCAATTACAAATGAAAATTCTTCAAAATTTAAAGAATGTATTCAATATTAA
ATGAAAAATTATAAGCTCAAAGCATCATTCTTTTTAGATAGCATGGCAGCAGTTATGTTAGTAGGATTAATCTGTTTAGT
TTTAATACCAATAATGAATCAAATGCGTATGAATTTCTATATTGAAGTAAAAAGTATAGATGCATCAAAGACTATTCTAA
CTGCGGCTTCCACAAATAGTAAAAATGAGCTTAAAAAAGGAGTTAAAATTGGAGAATATGTTATTAAGTTGGATGATAAG
CAAATTTGTGCAATTACAAATGAAAATTCTTCAAAATTTAAAGAATGTATTCAATATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
57.576 |
100 |
0.576 |
| comGE | Staphylococcus aureus MW2 |
49.123 |
100 |
0.566 |