Detailed information NTG0061528

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SII_RS05790
• Genome accession: NC_022237
• Coordinates: 1196553..1197584 (-)
• Length: 343 a.a.
• NCBI ID: WP_020998871.1
• Uniprot ID: -
• Organism: Streptococcus intermedius C270
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1191553..1202584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SII_RS05770 (SII_1136)	-	1192359..1192844 (-)	486	WP_020998868.1	LURP-one-related/scramblase family protein	-
SII_RS05775 (SII_1137)	prsA	1193069..1194007 (-)	939	WP_003073287.1	peptidylprolyl isomerase PrsA	-
SII_RS05780 (SII_1138)	-	1194114..1194797 (-)	684	WP_020998869.1	O-methyltransferase	-
SII_RS05785 (SII_1139)	pepF	1194799..1196601 (-)	1803	WP_020998870.1	oligoendopeptidase F	Regulator
SII_RS05790 (SII_1140)	coiA	1196553..1197584 (-)	1032	WP_020998871.1	competence protein CoiA	Machinery gene
SII_RS05795 (SII_1141)	celB	1197673..1199016 (-)	1344	WP_020998872.1	PTS cellobiose transporter subunit IIC	-
SII_RS05800 (SII_1142)	-	1199056..1199562 (-)	507	WP_020998873.1	hypothetical protein	-
SII_RS05805 (SII_1143)	-	1199585..1199902 (-)	318	WP_006267580.1	PTS cellobiose transporter subunit IIA	-
SII_RS05810 (SII_1144)	-	1199920..1201911 (-)	1992	WP_020998874.1	BglG family transcription antiterminator	-
SII_RS05815 (SII_1145)	-	1201967..1202281 (-)	315	WP_020998875.1	PTS cellobiose transporter subunit IIB	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 40447.82 Da
• Isoelectric Point: 9.3366

>NTDB_id=61528 SII_RS05790 WP_020998871.1 1196553..1197584(-) (coiA) [Streptococcus intermedius C270]
MLIACQENGNLLNAVEDTVNPLDKFLCPACLEAVRFKKGRIMRPHFAHISLKDCHFYTENESAEHLNLKAALFTWARKSN
HAVQVEAYLPKLQQIADLLVEKQIALEVQCSSLSQKRLKDRTDSYHQHGYHVLWLLGKKLWLKDSLTNLQKDFLYFSQNM
GFYLWELDDKKQELRLKYLIHEDLHGRVQYKVQSFPFGQGSLLTVLRTPFQRQEMTSFLAKEDKNICRYVRQQLYYQQPK
WMKLQAELYQAGDNLLTKTASDFYPQVHPVCASSFCQIFQDLTPYYQQFSAYYKKAKNKNLQVLYPPIFYAKIFGSIYDR
IGKTEEILWQNKEMKLKKNILGI

Nucleotide

• Length: 1032 bp

>NTDB_id=61528 SII_RS05790 WP_020998871.1 1196553..1197584(-) (coiA) [Streptococcus intermedius C270]
ATGTTAATAGCTTGTCAGGAAAATGGGAACCTACTAAATGCTGTGGAAGATACAGTAAATCCGCTGGATAAATTTCTCTG
TCCAGCTTGTTTGGAGGCGGTCCGTTTTAAAAAAGGAAGAATCATGCGACCGCATTTTGCTCATATTTCTTTAAAAGACT
GTCATTTTTATACGGAAAATGAAAGCGCAGAACACTTGAATTTGAAAGCTGCTTTGTTTACTTGGGCCAGAAAGTCTAAT
CATGCAGTTCAAGTGGAAGCGTATTTACCTAAATTGCAACAAATTGCAGATCTGTTAGTAGAGAAACAGATTGCGCTTGA
AGTTCAATGCAGTTCACTGAGTCAAAAGCGCTTAAAAGATCGTACAGACAGTTATCATCAACATGGTTATCATGTTCTTT
GGCTATTAGGAAAGAAACTTTGGCTGAAAGATTCTTTAACTAATTTGCAAAAAGATTTTCTTTATTTCAGTCAAAATATG
GGCTTTTATTTATGGGAATTGGATGATAAAAAGCAGGAGCTTCGGCTCAAGTATCTGATTCACGAAGATTTGCATGGCCG
AGTTCAATATAAGGTCCAGTCTTTTCCTTTTGGTCAGGGCAGCCTTTTGACTGTTCTGCGAACGCCCTTTCAACGGCAGG
AGATGACCAGTTTTTTAGCAAAAGAGGATAAAAATATTTGCCGTTATGTTCGTCAACAGCTCTATTATCAACAACCTAAA
TGGATGAAATTACAGGCAGAATTGTATCAAGCAGGTGATAATTTATTAACCAAAACGGCTAGTGACTTTTATCCGCAGGT
TCATCCGGTTTGTGCCAGCTCTTTCTGTCAAATTTTTCAAGATCTGACTCCTTATTATCAGCAATTTTCAGCTTATTATA
AAAAAGCAAAAAATAAAAATCTACAAGTTCTCTATCCGCCAATTTTTTATGCAAAGATTTTTGGTAGTATTTATGATAGA
ATAGGAAAGACGGAGGAAATTTTATGGCAAAACAAAGAAATGAAATTGAAGAAAAATATACTTGGGATTTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (23-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	53.503	91.545	0.49
coiA	Streptococcus mitis NCTC 12261	53.503	91.545	0.49
coiA	Streptococcus pneumoniae Rx1	53.185	91.545	0.487
coiA	Streptococcus pneumoniae D39	53.185	91.545	0.487
coiA	Streptococcus pneumoniae R6	53.185	91.545	0.487
coiA	Lactococcus lactis subsp. cremoris KW2	44.136	94.461	0.417