Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   RVR_RS36095 Genome accession   NZ_AP018365
Coordinates   8711273..8713039 (+) Length   588 a.a.
NCBI ID   WP_237405177.1    Uniprot ID   -
Organism   Streptomyces sp. SN-593     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 8706273..8718039
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - rcrP 8711273..8713039 (+) 1767 - - Regulator

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 62032.10 Da        Isoelectric Point: 9.7755

>NTDB_id=58276 RVR_RS36095 WP_237405177.1 8711273..8713039(+) (rcrP) [Streptomyces sp. SN-593]
MPEPPVGGAGGGALTRLLRVFLRPYAGLLAAMTALLAAQAAGNLYLPALNADLTNKGVVSGDTGYVWRTGGLMLAVVLGV
GLLSVATTWGTSRVAMGAGTRMRAALFRRVQAFSTAEVGRFGIPSLITRNINDVQQITAFLQAALAPLVMAVLMCAGAVV
MAVRESAALSLLLVVAVPVLALVIGGLLLVLVPMARTMQDRVDRINHVLREQITGVRVTRAFLRTGTEQQRFHRASADLT
AISLRTFRIYAAIMPVVMVVANLSSVGVIWFGGHLVSRGSTPIGNLTAFLVYVLQVLVYAVIAVSVIALAPRAVASAERV
DQVLRTDPVIADPADAVTPAEATGAVEFRHVDFGYPGGERPVLTDVTFTLRPGRTTGIVGSTGSGKTTLLQLILRAFDVT
GGEVLVDGVDVRRQSADRLRGPIGLVPQAGFLFGGTVASNLRFAAPDATDEQVWRALTTAQARDFVAAMPGGLDAPIDQG
GTNISGGQRQRLSIARALVRPSRLYLFDDCFSALDVATDARLRAALRDATREATVVIVAQRVSTIMHADQIIVLDAGRVV
GVGTHEHLLDQCVTYQEIVASQLGEEAA

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=58276 RVR_RS36095 WP_237405177.1 8711273..8713039(+) (rcrP) [Streptomyces sp. SN-593]
GTGCCTGAACCGCCGGTCGGCGGGGCGGGCGGCGGTGCGCTGACCCGCCTGCTGCGGGTTTTCCTGCGTCCCTACGCCGG
CCTGCTCGCCGCCATGACGGCCCTGCTGGCCGCGCAGGCGGCCGGGAACCTCTACCTGCCCGCCCTCAACGCCGACCTCA
CCAACAAGGGTGTCGTCAGCGGCGACACCGGCTACGTGTGGCGCACCGGCGGCCTGATGCTCGCCGTCGTCCTCGGCGTC
GGCCTGCTGTCGGTGGCCACCACCTGGGGCACGTCGCGGGTCGCGATGGGGGCCGGGACCCGGATGCGGGCCGCGCTGTT
CCGGCGCGTGCAGGCGTTCTCGACCGCCGAGGTGGGCCGGTTCGGCATCCCGTCGCTGATCACCCGCAACATCAACGACG
TCCAGCAGATCACCGCCTTCCTCCAGGCGGCCCTCGCGCCGCTGGTCATGGCGGTGCTGATGTGCGCCGGCGCGGTCGTC
ATGGCGGTCCGGGAGAGCGCCGCGCTGTCGCTGCTGCTGGTGGTCGCGGTCCCGGTGCTCGCACTCGTCATCGGCGGCCT
GCTGCTGGTCCTGGTGCCGATGGCCCGCACCATGCAGGACCGGGTCGACCGCATCAACCACGTGCTGCGCGAGCAGATCA
CCGGGGTCCGGGTCACCCGGGCCTTCCTGCGCACCGGCACCGAGCAGCAGCGCTTCCACCGGGCCAGCGCCGACCTCACC
GCGATCTCGCTGCGCACCTTCCGGATCTACGCCGCGATCATGCCGGTGGTCATGGTGGTCGCCAACCTCTCCAGCGTGGG
CGTCATATGGTTCGGCGGCCACCTGGTCAGCAGGGGCTCCACGCCGATCGGCAACCTGACCGCGTTCCTCGTCTACGTCC
TCCAGGTGCTGGTCTACGCCGTGATCGCGGTGTCCGTGATCGCGCTGGCCCCGCGCGCGGTGGCCAGCGCCGAGCGGGTC
GACCAGGTGCTGCGGACCGACCCGGTGATCGCCGACCCGGCCGACGCCGTCACACCCGCCGAGGCGACCGGCGCGGTGGA
GTTCCGCCACGTCGACTTCGGCTACCCCGGCGGTGAGCGGCCGGTCCTCACCGACGTCACGTTCACCCTGCGGCCGGGCC
GGACCACCGGCATCGTCGGCAGCACCGGCAGCGGGAAGACCACACTGCTCCAACTGATCCTGCGCGCCTTCGACGTGACC
GGGGGAGAGGTGCTCGTCGACGGCGTGGACGTCCGGCGGCAGTCCGCCGACCGGTTGCGCGGGCCGATCGGGCTGGTGCC
GCAGGCCGGCTTCCTCTTCGGCGGCACCGTGGCGAGCAACCTGCGCTTCGCGGCACCCGACGCCACGGACGAGCAGGTGT
GGCGGGCCCTGACCACCGCGCAGGCCCGCGACTTCGTGGCCGCCATGCCCGGCGGGCTCGACGCGCCCATCGACCAGGGC
GGCACCAACATCTCCGGCGGCCAGCGGCAGCGGCTGTCGATAGCCCGGGCGCTGGTCCGGCCGTCCCGGCTCTACCTGTT
CGACGACTGCTTCTCCGCACTCGACGTGGCGACCGACGCCCGCCTGCGCGCCGCCCTGCGCGACGCGACCCGCGAGGCCA
CCGTCGTGATCGTCGCCCAGCGGGTGAGCACGATCATGCACGCCGACCAGATCATCGTCCTGGACGCCGGGCGGGTCGTC
GGTGTCGGCACCCACGAGCACCTGCTCGACCAGTGCGTGACCTACCAGGAGATCGTCGCGTCGCAGTTGGGGGAGGAGGC
GGCATGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(31-296)

ABC transporter (ABC_tran)

(363-511)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

35.846

100

0.364