Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   RVR_RS10545 Genome accession   NZ_AP018365
Coordinates   2560163..2562085 (+) Length   640 a.a.
NCBI ID   WP_202238524.1    Uniprot ID   A0A7U3VN65
Organism   Streptomyces sp. SN-593     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2555163..2567085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - rcrQ 2560163..2562085 (+) 1923 - - Regulator

Sequence


Protein


Download         Length: 640 a.a.        Molecular weight: 69241.38 Da        Isoelectric Point: 5.8447

>NTDB_id=58233 RVR_RS10545 WP_202238524.1 2560163..2562085(+) (rcrQ) [Streptomyces sp. SN-593]
MAGPGGGRFIGGGPIERSMDFKGSLKRLIGLMRPDRAWTYLVLVLGTASAGLAVTGPRILGHATDLVFAGVIGRQTRGAD
KQQVLDTLRAHGNGKVADLLSGIDFTPGQGMDFGAIGNVLLLALCVYLGASLFSVMQMRTATKVINRAVYRLRRDVEDKL
SRLPLAYFDQQPRGEVLSRVTNDIDNIGQTMQQTLGQLVNALLTIIGVLAMMFWISWLLALVALVTMPVTLLVATRVGKR
AQPQFVKQWKTTGQLNAHIEEMYTGHSLVKVFGRAEESAAVFEEHNEALFRSGFRAQFISGTIQPLLTFIGNLNYVLVAV
VGGLRVATGALSVGDVQAFIQYSRQFSQPLTQVASMSNLIQSGVASAERVFELLDAEEQSDDPARPARPPETRGRVAMEE
VSFRYVPDKPLIDGLSLAVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVSGGRITLDGTDIAAMSREELRSSIGMVLQDTW
LFGGTIAENIGYGHEGATRERIEEAARAAHADRFIRTLPDGYDTVIDDEGTGVSAGEKQLITIARAFLSDPVILVLDEAT
SSVDTRTEVLIQRAMARLSHGRTSFVIAHRLSTIRDADVILVMESGAIVEQGTHDELLAEDGAYARLYSAQFAQAVAEVD

Nucleotide


Download         Length: 1923 bp        

>NTDB_id=58233 RVR_RS10545 WP_202238524.1 2560163..2562085(+) (rcrQ) [Streptomyces sp. SN-593]
GTGGCCGGGCCGGGAGGGGGCCGCTTCATCGGCGGCGGCCCGATCGAGCGGTCCATGGACTTCAAGGGCTCCCTGAAGCG
GCTGATCGGCCTGATGCGGCCGGACCGGGCCTGGACGTACCTGGTGCTGGTGCTCGGCACCGCGAGCGCCGGGCTGGCGG
TGACCGGGCCCCGTATCCTCGGCCACGCCACCGACCTGGTCTTCGCCGGCGTGATCGGCCGGCAGACCCGCGGCGCCGAC
AAGCAGCAGGTGCTCGACACGCTGCGCGCGCACGGGAACGGCAAGGTCGCCGACCTGCTGTCGGGCATCGACTTCACCCC
CGGCCAGGGCATGGACTTCGGCGCGATCGGCAACGTGCTGCTGCTCGCGCTGTGCGTGTACCTCGGCGCGTCGCTGTTCA
GCGTGATGCAGATGCGCACCGCGACGAAGGTGATCAACCGCGCGGTGTACCGGCTGCGCCGCGACGTGGAGGACAAGCTC
TCCCGGCTGCCGCTGGCGTACTTCGACCAGCAGCCGCGCGGCGAGGTGCTCAGCCGGGTCACGAACGACATCGACAACAT
CGGCCAGACCATGCAGCAGACCCTGGGTCAGCTCGTGAACGCGCTGCTGACCATCATCGGCGTGCTGGCGATGATGTTCT
GGATCTCCTGGCTGCTGGCACTGGTCGCGCTCGTCACCATGCCGGTCACGCTGCTGGTCGCCACCCGGGTCGGCAAACGG
GCGCAGCCGCAGTTCGTCAAGCAGTGGAAGACCACCGGCCAGTTGAACGCGCACATCGAGGAGATGTACACCGGGCACTC
CCTGGTGAAGGTCTTCGGCCGGGCGGAGGAGTCCGCGGCGGTCTTCGAGGAGCACAACGAGGCGCTCTTCCGCTCGGGCT
TCCGGGCGCAGTTCATCTCCGGCACGATCCAGCCGCTGCTGACGTTCATCGGCAACCTCAACTACGTCCTGGTGGCGGTG
GTCGGCGGGCTGCGGGTCGCGACGGGCGCGCTGTCGGTCGGCGACGTGCAGGCGTTCATCCAGTACTCACGGCAGTTCAG
CCAGCCGCTCACCCAGGTCGCGAGCATGTCGAACCTGATCCAGTCCGGGGTGGCCTCGGCCGAGCGGGTCTTCGAACTCC
TCGACGCCGAGGAGCAGTCGGACGACCCGGCGCGGCCGGCGCGCCCGCCGGAGACGCGCGGCCGGGTCGCGATGGAGGAG
GTCTCCTTCCGCTACGTGCCGGACAAGCCGCTGATCGACGGCCTGTCGCTGGCGGTGGAGCCCGGCCACACGGTGGCGAT
CGTCGGACCGACCGGGGCGGGCAAGACCACCCTGGTGAACCTGCTGATGCGGTTCTACGAGGTCTCCGGCGGCCGGATCA
CCCTGGACGGCACGGACATCGCCGCGATGTCCCGGGAGGAGCTGCGCTCCTCGATCGGCATGGTGCTCCAGGACACCTGG
CTGTTCGGCGGGACCATAGCCGAGAACATCGGCTACGGCCACGAGGGCGCCACCCGGGAGCGGATCGAGGAGGCGGCCCG
CGCCGCGCACGCCGACCGCTTCATCCGCACCCTGCCGGACGGCTACGACACGGTCATCGACGACGAGGGCACCGGCGTCA
GCGCCGGCGAGAAGCAGCTCATCACGATCGCGCGGGCGTTCCTCTCCGACCCGGTGATCCTCGTGCTCGACGAGGCGACC
AGCTCGGTGGACACCCGCACGGAGGTGCTCATCCAGCGCGCGATGGCGCGGCTCAGCCACGGCCGTACCAGCTTCGTCAT
CGCGCACCGGCTGTCCACGATCCGCGACGCCGACGTCATCCTCGTCATGGAGTCGGGCGCGATCGTCGAACAGGGCACCC
ACGACGAACTGCTCGCCGAGGACGGGGCCTACGCCCGGCTGTACTCGGCGCAGTTCGCACAGGCGGTCGCCGAGGTCGAC
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U3VN65

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.396

96.25

0.398


Multiple sequence alignment