Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   RVR_RS10535 Genome accession   NZ_AP018365
Coordinates   2556760..2558496 (+) Length   578 a.a.
NCBI ID   WP_202233592.1    Uniprot ID   A0A7U3UR90
Organism   Streptomyces sp. SN-593     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2551760..2563496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - rcrP 2556760..2558496 (+) 1737 - - Regulator

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 62633.05 Da        Isoelectric Point: 8.7202

>NTDB_id=58232 RVR_RS10535 WP_202233592.1 2556760..2558496(+) (rcrP) [Streptomyces sp. SN-593]
MLIRLLRSHLRPYKRPIVTLITLQLLSTIGALYLPTLNADIIDNGVVKGDTGYILGLGGVMLGVTVVQMTCAIGAVYFGA
RTAMSVGRDLRRSVFTQVQSFSAREVGQFGAPSLITRSTNDVQQVQMLVLMSFTLMVTAPIMCVGGIIMALGQDVPLSAL
LLVVVPVLGVSVSLIVRRMRPLFRTMQKRVDSVNRVLREQITGIRVIRAFVKDGYERQRFGAANDELTAVSLSTGRLMAL
MFPTVMAIVNVSSVAVLWFGAHRIDSGGMKIGALTAFLTYLMQILMSVMMATFMFMMVPRAEVCAERIQEVLGTESSVVR
PAAPVTTLRRHGHLELRGATFAYPGAEAAVLRDVDLEALPGQTTAVIGSTGSGKSTLLGLIPRLYDATAGRVLVDGEDVS
RLDPALLAETVGLVPQKPYLFSGTVASNLRYGKPDATDEELWHALRVAQAEDFVRKLEGGLEAPIAQGGGNVSGGQRQRL
AIARCLVRRPEIYLFDDSFSALDYATDAALRRALAEETAEATVVIVAQRVSTIRDAHRIVVLDEGRVVGTGTHSELMRDN
ETYREIVLSQLTEQEAAA

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=58232 RVR_RS10535 WP_202233592.1 2556760..2558496(+) (rcrP) [Streptomyces sp. SN-593]
GTGCTGATCCGACTCCTGCGCTCCCACCTGAGACCGTACAAACGTCCCATCGTGACGCTGATCACGCTCCAGCTGCTGTC
CACGATCGGCGCCCTCTACCTGCCGACCCTGAACGCCGACATCATCGACAACGGCGTGGTCAAGGGTGACACCGGGTACA
TCCTCGGGCTGGGCGGGGTCATGCTCGGCGTGACCGTGGTGCAGATGACGTGCGCGATCGGCGCGGTCTACTTCGGCGCC
AGGACCGCGATGTCCGTCGGCCGCGACCTGCGCAGGTCCGTCTTCACCCAGGTGCAGAGCTTCTCCGCGCGCGAGGTCGG
CCAGTTCGGGGCGCCGTCGCTGATCACCCGCAGCACCAACGACGTGCAGCAGGTCCAGATGCTGGTGCTGATGAGCTTCA
CGCTGATGGTGACCGCGCCGATCATGTGCGTGGGCGGCATCATCATGGCGCTCGGCCAGGACGTGCCGCTGTCCGCGCTG
CTGCTCGTCGTGGTCCCGGTGCTCGGTGTCTCGGTGAGCCTGATCGTCCGCAGGATGCGCCCGCTCTTCCGCACCATGCA
GAAGCGCGTCGACTCCGTGAACCGGGTGCTGCGCGAGCAGATCACCGGGATCCGGGTGATCCGCGCGTTCGTCAAGGACG
GCTACGAGCGGCAGCGCTTCGGGGCCGCCAACGACGAGCTGACCGCGGTGTCACTGTCCACCGGGCGGCTGATGGCGCTG
ATGTTCCCGACCGTGATGGCGATCGTGAACGTCTCCAGCGTGGCCGTGCTCTGGTTCGGCGCGCACCGGATCGACAGCGG
CGGTATGAAGATCGGCGCGCTCACCGCGTTCCTGACCTACCTGATGCAGATCCTGATGTCGGTCATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGGATCCAGGAGGTGCTCGGCACCGAGTCCAGCGTGGTGCGG
CCGGCCGCGCCGGTCACCACCCTGCGCCGGCACGGCCACCTCGAACTGCGCGGCGCGACCTTCGCCTACCCCGGCGCCGA
GGCCGCGGTGCTGCGCGACGTCGACCTGGAGGCCCTGCCCGGGCAGACCACCGCGGTGATCGGCTCCACCGGCAGCGGCA
AGTCCACCCTCCTCGGCCTGATCCCGCGGTTGTACGACGCGACCGCCGGCCGGGTACTGGTCGACGGCGAGGACGTGTCC
CGGCTCGACCCCGCGCTCCTGGCCGAGACCGTCGGCCTGGTACCGCAGAAGCCCTACCTGTTCTCCGGGACCGTGGCGAG
CAACCTGCGCTACGGCAAGCCCGACGCCACCGACGAGGAGCTGTGGCACGCGCTGAGGGTCGCGCAGGCCGAGGACTTCG
TCCGGAAGCTGGAAGGAGGTCTGGAGGCGCCGATCGCGCAGGGCGGCGGCAACGTCTCCGGCGGCCAGCGGCAGCGGTTG
GCGATCGCCCGCTGCCTGGTGCGGCGCCCCGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTGGACTACGCCACCGA
CGCGGCGCTGCGCCGCGCGCTGGCGGAGGAGACCGCCGAGGCCACCGTGGTGATCGTCGCCCAACGGGTCTCCACGATCC
GCGACGCGCACCGCATCGTGGTCCTCGACGAGGGCCGCGTGGTCGGCACCGGCACCCACAGCGAGCTGATGCGCGACAAC
GAGACCTACCGGGAGATCGTGCTGTCCCAGCTCACCGAGCAGGAGGCGGCGGCGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(20-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U3UR90

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.255

94.983

0.382

Multiple sequence alignment