Detailed information NTG0058223

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RVR_RS03940
• Genome accession: NZ_AP018365
• Coordinates: 945916..947268 (-)
• Length: 450 a.a.
• NCBI ID: WP_202232508.1
• Uniprot ID: A0A7U3UNW0
• Organism: Streptomyces sp. SN-593
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 940916..952268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
-	rarA	945916..947268 (-)	1353	-	-	Machinery gene

Sequence

Protein

• Length: 450 a.a.
• Molecular weight: 47808.16 Da
• Isoelectric Point: 6.1983

>NTDB_id=58223 RVR_RS03940 WP_202232508.1 945916..947268(-) (rarA) [Streptomyces sp. SN-593]
MEPDLFSAAAEERREREPGSSPLAVRMRPRTLEEVVGQQHLLRTGSPLRRLVSEGGAGPAGASSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIESAKRQAGGYDRETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDIRGVLRRALTDERGLDGAVTLPQDAEEHLLRIAGGDARRALTALEAGAGSALAKGEEA
ITLATVEEAVDRAAVAYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIVAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVAMIGFPEASLILSHATIALALAPKSNAATTAIGAALADVRAGRAGPVPAHLRDGHYKGAAKLGHAQGYVY
PHDVPGAIAAQQYLPDEIADRRYYEPTRYGAEARFADVLDRVRSRLAGGG

Nucleotide

• Length: 1353 bp

>NTDB_id=58223 RVR_RS03940 WP_202232508.1 945916..947268(-) (rarA) [Streptomyces sp. SN-593]
GTGGAGCCAGATCTGTTCAGCGCGGCGGCGGAGGAGCGACGCGAGCGGGAGCCGGGCAGCAGCCCGCTCGCGGTGCGGAT
GCGGCCGCGCACCCTTGAGGAAGTGGTCGGCCAGCAGCATCTGCTGCGCACCGGTTCGCCGCTGCGGCGGCTGGTGTCCG
AGGGCGGTGCCGGGCCGGCGGGCGCCTCCTCGGTGATCCTGTGGGGCCCGCCCGGCACCGGCAAGACCACCCTCGCCTAC
GTGGTGAGCAAAGCCACCAACAAGCGGTTCGTGGAGCTGTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCCGTCAT
CGAGTCCGCCAAGCGCCAGGCGGGCGGGTACGACCGCGAGACCGTGCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CACAGCAGGACTCCCTGCTGCCCGCGGTGGAGAACCGCTGGGTGACCCTGATCGCGGCCACCACGGAGAACCCGTACTTC
TCGGTGATCTCGCCGCTGCTGTCCCGCTCCCTCCTGCTGACGCTGGAACCCCTCACCGACGACGACATCCGCGGGGTGCT
GCGCCGGGCGCTCACCGACGAGCGGGGGCTCGACGGCGCGGTCACCCTCCCGCAGGACGCCGAGGAGCACCTGCTGCGGA
TCGCCGGCGGCGACGCGCGCCGGGCGCTGACCGCGCTGGAGGCCGGCGCCGGCTCCGCCCTCGCCAAGGGGGAGGAGGCG
ATCACCCTCGCCACCGTCGAGGAGGCCGTCGACCGTGCCGCGGTGGCCTACGACCGCGACGGCGACCAGCACTACGACGT
GGCGAGCGCGCTGATCAAGTCGATCCGCGGGTCCGACGTGGACGCGGCGCTGCACTACCTGGCGCGGATGATCGTGGCGG
GGGAGGACCCCCGCTTCATCGCCCGCCGGCTGATGATCTCGGCGAGCGAGGACATCGGGCTGGCCGACCCGACCGCGCTG
CCCACGGCGGTCGCCGCCGCCCAGGCGGTCGCGATGATCGGGTTCCCCGAGGCGTCCCTCATCCTCAGCCACGCCACCAT
CGCGCTCGCCCTCGCCCCGAAGTCCAACGCGGCGACCACCGCGATCGGGGCCGCCCTGGCGGACGTGCGGGCCGGCAGGG
CCGGACCGGTGCCCGCGCACCTGCGCGACGGCCACTACAAGGGAGCGGCGAAGCTCGGCCACGCCCAGGGGTACGTCTAC
CCCCACGACGTGCCCGGCGCGATCGCCGCGCAGCAGTACCTGCCCGACGAGATCGCCGACCGCCGGTACTACGAACCGAC
CCGCTACGGCGCCGAGGCCCGCTTCGCGGACGTCCTCGACCGGGTGCGCAGCCGCCTTGCCGGGGGTGGCTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

3D structure

• AlphaFold DB: A0A7U3UNW0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	46.047	95.556	0.44