Detailed information NTG0581746

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: KTN74_RS05540
• Genome accession: NZ_CP077633
• Coordinates: 1072510..1073469 (+)
• Length: 319 a.a.
• NCBI ID: WP_217315712.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain R16.2162
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1067510..1078469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTN74_RS05515 (KTN74_05515)	neuC	1068076..1069191 (+)	1116	WP_217315711.1	UDP-N-acetylglucosamine 2-epimerase	-
KTN74_RS08965 (KTN74_05520)	-	1069188..1070102 (+)	915	Protein_1082	beta-1,4-N-acetylgalactosaminyltransferase	-
KTN74_RS08970 (KTN74_05525)	-	1070136..1070798 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
KTN74_RS05530 (KTN74_05530)	-	1070793..1071643 (-)	851	Protein_1084	glycosyltransferase	-
KTN74_RS05535 (KTN74_05535)	waaV	1071627..1072451 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
KTN74_RS05540 (KTN74_05540)	waaF	1072510..1073469 (+)	960	WP_217315712.1	lipopolysaccharide heptosyltransferase II	Regulator
KTN74_RS05545 (KTN74_05545)	gmhA	1073450..1074010 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
KTN74_RS05550 (KTN74_05550)	rfaE1	1074007..1075392 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
KTN74_RS05555 (KTN74_05555)	rfaD	1075385..1076338 (-)	954	WP_217315713.1	ADP-glyceromanno-heptose 6-epimerase	-
KTN74_RS05560 (KTN74_05560)	gmhB	1076339..1076899 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
KTN74_RS05565 (KTN74_05565)	-	1076981..1077283 (+)	303	WP_002852762.1	cytochrome c	-
KTN74_RS05570 (KTN74_05570)	ccoS	1077306..1077512 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36730.32 Da
• Isoelectric Point: 10.2412

>NTDB_id=581746 KTN74_RS05540 WP_217315712.1 1072510..1073469(+) (waaF) [Campylobacter jejuni strain R16.2162]
MKIFIHLPTWLGDTVMASPALYIIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLPKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=581746 KTN74_RS05540 WP_217315712.1 1072510..1073469(+) (waaF) [Campylobacter jejuni strain R16.2162]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACATTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACCTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	99.373	100	0.994