Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   I6L29_RS02085 Genome accession   NZ_CP077238
Coordinates   458894..461326 (+) Length   810 a.a.
NCBI ID   WP_005073076.1    Uniprot ID   -
Organism   Acinetobacter pittii strain FDAARGOS 1399     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 453894..466326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L29_RS02060 (I6L29_02060) - 454046..454987 (-) 942 WP_002118998.1 hypothetical protein -
  I6L29_RS02065 (I6L29_02065) - 455234..455722 (+) 489 WP_078210287.1 YaiI/YqxD family protein -
  I6L29_RS02070 (I6L29_02070) - 455730..456638 (+) 909 WP_002118971.1 DMT family transporter -
  I6L29_RS19040 - 456668..456769 (-) 102 Protein_391 PilZ domain-containing protein -
  I6L29_RS02075 (I6L29_02075) lolC 456898..458133 (+) 1236 WP_031944989.1 lipoprotein-releasing ABC transporter permease subunit -
  I6L29_RS02080 (I6L29_02080) lolD 458126..458812 (+) 687 WP_002118798.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  I6L29_RS02085 (I6L29_02085) comA/comEC 458894..461326 (+) 2433 WP_005073076.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6L29_RS02090 (I6L29_02090) - 461279..462262 (-) 984 WP_002118440.1 lysophospholipid acyltransferase family protein -
  I6L29_RS02095 (I6L29_02095) sppA 462396..463412 (+) 1017 WP_005067744.1 signal peptide peptidase SppA -
  I6L29_RS02100 (I6L29_02100) - 463436..464236 (+) 801 WP_002118584.1 alpha/beta fold hydrolase -
  I6L29_RS02105 (I6L29_02105) purN 464312..464941 (-) 630 WP_005073082.1 phosphoribosylglycinamide formyltransferase -
  I6L29_RS02110 (I6L29_02110) purM 464938..466008 (-) 1071 WP_005073084.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 810 a.a.        Molecular weight: 92709.25 Da        Isoelectric Point: 8.8185

>NTDB_id=580159 I6L29_RS02085 WP_005073076.1 458894..461326(+) (comA/comEC) [Acinetobacter pittii strain FDAARGOS 1399]
MLKLILMGWIGGIVFMGIDIPLIMQYGWLGKVLLVIGFILYIFKRNLFLNRPILKAIYCLVCAISLFTIGYQYAQHALNE
RLELRQMQLKSLDIIVYVDRISEEKEDKTQQPVQVLGQSLHPVNWLLYLKNQKVISAIDEPKLQLGHYYRISGKTKPAHS
YAVAGVFDQEQWFIQRNIMSAFSVQHIEPLSSDEIYQLGYQHHLKEQQKFFNRQKLNVEKLRLTFRLMLKQSPLQNKGLL
LALLTGDESLLNDEIKNQFKELGVSHLLAISGPHVLIFAIMLSWVLHQLIRRYYPQLYLRQPKQIWTMIPLCFGVLIYTA
FVGFEIPALRTLLSVFLFASLVLIKVPVKPFSLLVYSASLLLLFDPFSVLSAGFWLSYGSCFILLRIYQTIEQAPNVVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFNSFGNLLFQISD
VLVSIVLSCFNLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLIIPDKSSQQVQLNIIDVGQGQ
AIFLQHPEQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPSIAQTFPIKQVISNELWKEQ
IREPFTYCHQGQKFQYPQLDIEILWPKEKDLNLVSSNQNQYSCVIYIHLKQINGYQNYLIMGDAGLEAEYQLMKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLNPKLVVASAGFNNRYGHPSKEVLARVQELNIPFKSTVEQGTLSFVSRNQEMVLYTRR
FERTWLHRNL

Nucleotide


Download         Length: 2433 bp        

>NTDB_id=580159 I6L29_RS02085 WP_005073076.1 458894..461326(+) (comA/comEC) [Acinetobacter pittii strain FDAARGOS 1399]
ATGTTAAAACTTATTTTAATGGGGTGGATTGGGGGTATTGTATTTATGGGGATAGATATCCCTTTAATAATGCAATATGG
GTGGTTAGGTAAAGTCTTGCTTGTTATCGGCTTTATTCTTTATATTTTTAAGAGAAATTTATTCTTAAATCGCCCCATAT
TAAAAGCTATTTACTGTCTAGTCTGTGCTATTAGTCTTTTTACTATAGGATATCAATATGCTCAGCATGCCTTAAATGAA
AGATTAGAACTGCGACAAATGCAGCTTAAATCTTTAGATATTATCGTGTATGTCGATCGTATAAGTGAAGAAAAAGAAGA
TAAAACACAACAACCCGTTCAGGTACTAGGGCAGTCCCTACATCCCGTCAATTGGCTATTATATTTAAAAAATCAAAAAG
TAATCTCAGCTATAGATGAGCCAAAATTACAATTAGGTCATTATTATCGAATTTCTGGCAAAACCAAACCTGCTCATAGT
TACGCAGTGGCTGGTGTTTTTGACCAAGAACAATGGTTCATTCAACGAAATATAATGTCCGCTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCCGATGAAATTTATCAGTTGGGTTATCAACATCATTTAAAAGAGCAACAAAAATTCTTTAACAGAC
AAAAGTTAAATGTAGAAAAGTTGCGCCTAACATTTAGATTAATGTTAAAACAATCTCCTTTGCAAAATAAAGGTCTGTTA
TTAGCTTTGTTAACAGGGGACGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAAGAATTAGGAGTCTCTCATCT
GTTAGCCATTTCAGGGCCTCATGTACTCATTTTTGCTATCATGTTGTCTTGGGTATTACATCAATTAATAAGACGTTATT
ATCCGCAGCTTTATTTGCGTCAACCTAAACAAATTTGGACCATGATTCCATTATGTTTCGGTGTTTTGATTTATACGGCA
TTTGTTGGTTTTGAAATTCCTGCCTTAAGAACTTTACTCTCAGTATTTTTATTTGCTTCTTTGGTATTGATTAAAGTGCC
TGTTAAACCATTTTCACTCTTGGTTTATAGTGCAAGTCTACTTTTACTTTTCGATCCCTTCAGTGTTTTATCCGCAGGTT
TTTGGCTGTCTTATGGTTCTTGCTTTATTTTATTACGGATTTATCAAACTATAGAGCAGGCTCCAAATGTTGTTTCAACT
AGTCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTATGTCCTCT
AATGTTGATTTTCTTTCAACAGATTTCATGGGTTGCTCCTTTTACAAATATTATTGCAGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAATATTTTTGCAGCTTGTGTATGGCTTATTTTTAACTCATTCGGAAATTTACTTTTTCAAATTAGTGAT
GTCCTGGTTAGTATAGTACTGTCATGTTTTAATCTTTTAGAAAAGTTATCTCTACCATTACAAGGTTTTAGCCTCACACC
ACTTGATTTAGTGTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCCAAATCTTGGGGGCTAA
TATGCTGTTTACCCTTGATCATTCCAGATAAGTCGTCCCAGCAAGTTCAATTAAATATTATAGACGTAGGCCAAGGACAA
GCGATTTTTCTACAACATCCAGAGCAGACATGGTTAATTGATACGGGTGGTTCTTATGATGAGAAGGCTTTTAGTATTGG
TCAAAATGTGGTAATTCCATATTTACGTCAAAAGGGAATTAAGCAACTGGATCACGTCGTACTATCTCATCTTGATCAAG
ATCATAGCGGAGCATTTCCTTCTATTGCTCAGACTTTTCCTATTAAACAAGTCATATCAAATGAATTATGGAAAGAGCAA
ATTAGAGAACCATTTACTTATTGTCATCAAGGGCAAAAATTTCAATATCCACAATTAGATATTGAAATTCTTTGGCCTAA
AGAAAAAGATTTAAACTTAGTTTCTTCAAATCAAAATCAATATTCTTGTGTGATTTATATTCATTTAAAACAGATAAATG
GCTATCAAAATTATTTAATCATGGGCGATGCAGGGTTGGAAGCAGAATATCAACTCATGAAAGAGTATCCTGATTTAAAG
GTAGATGTTTTGGTATTAGGTCATCATGGAAGTAAACATAGTTCGGCTTACGACTTCTTGGCGACGTTAAACCCCAAGCT
TGTTGTTGCTTCTGCTGGCTTTAATAATCGTTATGGTCATCCAAGCAAAGAGGTTTTAGCGAGAGTACAAGAACTTAATA
TTCCGTTTAAAAGCACAGTTGAGCAAGGAACATTAAGCTTTGTATCTCGCAATCAAGAGATGGTTTTATACACTCGACGT
TTCGAGCGTACTTGGCTTCACAGGAATTTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

69.592

99.877

0.695

  comA/comEC Acinetobacter baumannii strain A118

68.727

99.877

0.686

  comA/comEC Acinetobacter baylyi ADP1

48.585

100

0.488