Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC/comC1   Type   Regulator
Locus tag   KRG72_RS08265 Genome accession   NZ_CP076703
Coordinates   1666772..1666915 (+) Length   47 a.a.
NCBI ID   WP_160172983.1    Uniprot ID   A0A091BVM0
Organism   Streptococcus equinus strain S1     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1661772..1671915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS08240 comD/comD3 1662588..1663367 (-) 780 WP_258254911.1 sensor histidine kinase Regulator
  KRG72_RS08245 (KRG72_08255) - 1664115..1664408 (-) 294 WP_205395459.1 bacteriocin immunity protein -
  KRG72_RS08250 (KRG72_08260) - 1664436..1664741 (-) 306 WP_133018012.1 bacteriocin immunity protein -
  KRG72_RS08255 (KRG72_08265) - 1664754..1664903 (-) 150 WP_039696228.1 hypothetical protein -
  KRG72_RS08260 (KRG72_08270) - 1665147..1666457 (-) 1311 WP_258254918.1 sensor histidine kinase -
  KRG72_RS08265 (KRG72_08275) comC/comC1 1666772..1666915 (+) 144 WP_160172983.1 hypothetical protein Regulator
  KRG72_RS08270 (KRG72_08280) comD/comD1 1666938..1668260 (-) 1323 WP_074799079.1 sensor histidine kinase Regulator
  KRG72_RS08275 (KRG72_08285) comE/comE1 1668265..1668996 (-) 732 WP_258254926.1 response regulator transcription factor Regulator
  KRG72_RS08280 (KRG72_08290) - 1670027..1671319 (-) 1293 WP_258254929.1 glycosyltransferase family 2 protein -
  KRG72_RS08285 (KRG72_08295) - 1671322..1671621 (-) 300 WP_157327346.1 DUF3884 family protein -
  KRG72_RS08290 (KRG72_08300) - 1671647..1671829 (-) 183 WP_157327348.1 hypothetical protein -

Sequence

Protein


Download         Length: 47 a.a.        Molecular weight: 5314.03 Da        Isoelectric Point: 5.7003

>NTDB_id=577483 KRG72_RS08265 WP_160172983.1 1666772..1666915(+) (comC/comC1) [Streptococcus equinus strain S1]
MTEWKMSESVKELTDSDLEKTVGGNGNPLLTGVVDWFKIFNKTKTHT

Nucleotide


Download         Length: 144 bp        

>NTDB_id=577483 KRG72_RS08265 WP_160172983.1 1666772..1666915(+) (comC/comC1) [Streptococcus equinus strain S1]
ATGACAGAATGGAAAATGTCAGAATCAGTCAAAGAATTGACTGATTCTGATTTGGAGAAGACAGTTGGAGGAAATGGTAA
TCCTCTACTTACTGGTGTTGTTGATTGGTTTAAAATTTTTAATAAAACTAAAACACACACATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A091BVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC/comC1 Streptococcus equinus JB1

100

100

1