Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | I653_RS12280 | Genome accession | NC_020832 |
| Coordinates | 2467362..2467772 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis subsp. subtilis str. BAB-1 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2462362..2472772
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I653_RS12250 (I653_12370) | - | 2462449..2462589 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| I653_RS12255 (I653_12380) | yqeF | 2462895..2463626 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| I653_RS12260 (I653_12385) | cwlH | 2463878..2464630 (-) | 753 | WP_015483449.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| I653_RS12265 (I653_12390) | yqeD | 2464817..2465443 (+) | 627 | WP_015384137.1 | TVP38/TMEM64 family protein | - |
| I653_RS12270 (I653_12395) | gnd | 2465462..2466355 (-) | 894 | WP_015384138.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| I653_RS12275 (I653_12400) | yqeB | 2466607..2467329 (+) | 723 | WP_015384139.1 | hypothetical protein | - |
| I653_RS12280 (I653_12405) | nucA/comI | 2467362..2467772 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| I653_RS12285 (I653_12410) | sigK | 2467968..2468696 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| I653_RS20575 (I653_12420) | - | 2468778..2468969 (-) | 192 | Protein_2466 | recombinase family protein | - |
| I653_RS20580 (I653_12425) | - | 2468927..2469091 (-) | 165 | WP_015483452.1 | hypothetical protein | - |
| I653_RS12290 (I653_12430) | psiE | 2469632..2470048 (-) | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| I653_RS12295 (I653_12435) | yrkQ | 2470094..2471392 (-) | 1299 | WP_015483453.1 | two-component system sensor histidine kinase YrkQ | - |
| I653_RS12300 (I653_12440) | yrkP | 2471379..2472074 (-) | 696 | WP_015384143.1 | two-component response regulator YrkP | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=57533 I653_RS12280 WP_009967785.1 2467362..2467772(-) (nucA/comI) [Bacillus subtilis subsp. subtilis str. BAB-1]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=57533 I653_RS12280 WP_009967785.1 2467362..2467772(-) (nucA/comI) [Bacillus subtilis subsp. subtilis str. BAB-1]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |