Detailed information NTG0539459

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: JWB56_RS18615
• Genome accession: NZ_CP070362
• Coordinates: 3825683..3826741 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain AB5075-VUB
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3820683..3831741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWB56_RS18600 (JWB56_18345)	-	3821789..3822121 (+)	333	WP_000169598.1	hypothetical protein	-
JWB56_RS18605 (JWB56_18350)	-	3822124..3822948 (+)	825	WP_001990541.1	putative RNA methyltransferase	-
JWB56_RS18610 (JWB56_18355)	ponA	3822966..3825521 (-)	2556	WP_000736662.1	penicillin-binding protein PBP1a	-
JWB56_RS18615 (JWB56_18360)	pilM	3825683..3826741 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
JWB56_RS18620 (JWB56_18365)	pilN	3826741..3827382 (+)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
JWB56_RS18625 (JWB56_18370)	pilO	3827379..3828119 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
JWB56_RS18630 (JWB56_18375)	pilP	3828130..3828657 (+)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
JWB56_RS18635 (JWB56_18380)	pilQ	3828720..3830885 (+)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
JWB56_RS18640 (JWB56_18385)	aroK	3830897..3831466 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=539459 JWB56_RS18615 WP_002014066.1 3825683..3826741(+) (pilM) [Acinetobacter baumannii strain AB5075-VUB]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=539459 JWB56_RS18615 WP_002014066.1 3825683..3826741(+) (pilM) [Acinetobacter baumannii strain AB5075-VUB]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423