Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   K2224_RS09150 Genome accession   NZ_CP081496
Coordinates   2052198..2053931 (+) Length   577 a.a.
NCBI ID   WP_221906092.1    Uniprot ID   -
Organism   Streptomyces sp. BHT-5-2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2047198..2058931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - rcrP 2052198..2053931 (+) 1734 - - Regulator

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62882.41 Da        Isoelectric Point: 6.1046

>NTDB_id=522806 K2224_RS09150 WP_221906092.1 2052198..2053931(+) (rcrP) [Streptomyces sp. BHT-5-2]
MLLRLARAHLLPYRRSISLVVLLQLIQTLATLYLPTLNADIIDNGVVKGDTGYIFGVGAFMIAVTVLQIACAIGAVYFGA
RTAMALGRDVRAAVFDRVQSFSAREMGGFGAPSLITRTTNDVQQVQMLVLMTFTMMVSAPIMCVGGIVMALNQDVPLSAL
LLVIVPVLGILVSLIVRRLRPLFRGVQERIDTVNRVLREQIAGIRVIRAFVRDDHERERFARANTDLYDVSMRAGRLMSM
MFPLVMLIVNLSSVAVVWFGALRIDAQKMEIGALTAFLSYLMYILMSIMMATFMVMMLPRAEVCAERIQEVLATESSVTP
PAEPVTTLRRHGELELRDVEFRFPGAEQPVLRDVSLIARPGETTAVIGSTGAGKSTLLGLVPRLFDATGGTVLVDGEDVR
TLAPETLASVVGLVPQKPYLFSGTVATNLRYGNPDATDEELWHALETAQARDFVERMEGGLDAPVAQGGTNVSGGQRQRL
AIARALVRKPEIYLFDDSFSALDYATDAALRAALARETDRATVVIVAQRVATIRGADRIVVLDEGRIVGTGTHGELMAGN
ETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=522806 K2224_RS09150 WP_221906092.1 2052198..2053931(+) (rcrP) [Streptomyces sp. BHT-5-2]
GTGTTGCTCCGACTCGCGCGGGCGCATCTGCTGCCCTACAGGCGCTCCATATCCCTCGTCGTCCTGCTCCAGCTGATCCA
GACGCTCGCCACGCTGTATCTGCCGACCCTCAACGCCGACATCATCGACAACGGTGTCGTCAAGGGCGACACCGGCTACA
TCTTCGGCGTCGGCGCCTTCATGATCGCGGTGACGGTGCTCCAGATCGCCTGCGCGATCGGCGCGGTCTACTTCGGCGCC
CGTACGGCCATGGCGCTCGGCCGGGACGTCCGGGCCGCCGTCTTCGACCGGGTGCAGTCCTTCTCCGCCCGCGAGATGGG
CGGCTTCGGCGCCCCGTCGCTGATCACCCGCACCACCAACGACGTCCAGCAGGTCCAGATGCTGGTCCTGATGACGTTCA
CGATGATGGTCTCGGCGCCGATCATGTGCGTCGGCGGCATCGTCATGGCGCTCAACCAGGACGTGCCGCTGTCGGCGCTC
CTCCTGGTCATCGTCCCGGTCCTCGGGATCCTCGTCTCACTGATCGTGCGCCGGTTGCGCCCGCTGTTCCGCGGGGTGCA
GGAGCGCATCGACACCGTCAACCGCGTGCTGCGCGAGCAGATCGCCGGCATCCGCGTCATCCGCGCCTTCGTCCGCGACG
ACCACGAACGCGAGCGGTTCGCCCGGGCCAACACCGACCTCTACGACGTCTCGATGCGCGCCGGCCGGCTGATGTCGATG
ATGTTCCCGCTGGTCATGCTGATCGTGAACCTCTCCAGCGTGGCCGTCGTGTGGTTCGGCGCGCTGCGCATCGACGCGCA
GAAGATGGAGATCGGGGCGCTGACGGCCTTCCTCAGCTACCTGATGTACATCCTGATGTCGATCATGATGGCGACGTTCA
TGGTGATGATGCTGCCGCGCGCCGAGGTCTGCGCCGAGCGCATCCAGGAGGTGCTGGCGACCGAGTCCAGCGTCACCCCG
CCCGCCGAGCCGGTCACCACGCTGCGCCGGCACGGCGAACTGGAGCTCCGGGACGTGGAGTTCCGTTTCCCCGGCGCCGA
GCAGCCGGTCCTGCGGGACGTCAGCCTGATCGCCCGCCCCGGCGAGACCACCGCCGTCATCGGCTCCACCGGTGCCGGCA
AGTCCACCCTCCTCGGGCTGGTACCGCGGCTGTTCGACGCCACCGGCGGCACCGTCCTGGTCGACGGCGAGGACGTGCGC
ACCCTGGCCCCGGAGACGCTGGCCTCCGTGGTCGGCCTGGTGCCGCAGAAGCCGTACCTCTTCTCCGGGACGGTCGCCAC
CAACCTGCGGTACGGCAATCCCGACGCCACCGACGAGGAACTGTGGCACGCGCTGGAGACCGCGCAGGCCAGGGACTTCG
TCGAGCGGATGGAGGGCGGCCTGGACGCGCCGGTCGCGCAGGGCGGCACCAATGTCTCCGGCGGCCAGCGGCAGCGGCTG
GCGATCGCCCGCGCCCTGGTCCGCAAGCCCGAGATCTACCTCTTCGACGACTCCTTCTCCGCCCTCGACTACGCCACCGA
CGCGGCCCTGCGCGCCGCGCTGGCCCGGGAGACCGACCGGGCCACCGTGGTGATCGTCGCCCAGCGGGTCGCAACGATCC
GCGGCGCCGACCGGATCGTGGTCCTGGACGAGGGCCGGATCGTGGGGACCGGCACCCACGGCGAGCTGATGGCCGGCAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTCACCGAGCAGGAGGCGGCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

41.071

97.054

0.399