Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   I6H77_RS02900 Genome accession   NZ_CP066021
Coordinates   611216..612712 (-) Length   498 a.a.
NCBI ID   WP_000759884.1    Uniprot ID   A0A0F2CWP0
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 606216..617712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS02880 (I6H77_02880) - 606746..608185 (+) 1440 WP_001043430.1 TrkH family potassium uptake protein -
  I6H77_RS02885 (I6H77_02885) amiF 608274..609203 (-) 930 WP_001291310.1 ATP-binding cassette domain-containing protein Regulator
  I6H77_RS02890 (I6H77_02890) amiE 609214..610281 (-) 1068 WP_000159799.1 ABC transporter ATP-binding protein Regulator
  I6H77_RS02895 (I6H77_02895) amiD 610290..611216 (-) 927 WP_000103935.1 oligopeptide ABC transporter permease OppC Regulator
  I6H77_RS02900 (I6H77_02900) amiC 611216..612712 (-) 1497 WP_000759884.1 ABC transporter permease Regulator
  I6H77_RS02905 (I6H77_02905) amiA 612779..614758 (-) 1980 WP_000749706.1 peptide ABC transporter substrate-binding protein Regulator
  I6H77_RS02915 (I6H77_02915) - 615261..616592 (-) 1332 WP_000390016.1 hemolysin family protein -
  I6H77_RS02920 (I6H77_02920) endA 616728..617552 (-) 825 WP_000359002.1 DNA/RNA non-specific endonuclease Machinery gene

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55671.05 Da        Isoelectric Point: 9.2397

>NTDB_id=516448 I6H77_RS02900 WP_000759884.1 611216..612712(-) (amiC) [Streptococcus oralis strain FDAARGOS_1020]
MKKYIFMRVLRSLLSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTPDKRDNYENTVYERMGYIEYYDTKELQEKAS
TIDSSVTVDANDTNKAIYEKYINQLGNGWTLGVFSESGQFYATREIPIFERVFKFYANLIDIDHTNKIQDPENPNLQRYL
RFENDPAIGWSLVGSGTKHKYLLYFNNQFPFVHQNFVNVNLGDSYPTYANTPVLQVITQGQGQTKTSEVQFPTGKKTSSV
DIYSRTYKSPSQADAREVANYGKDDPYTATESNYQYPSMIASSAVAGLIGLIISYAIAIPLGSAMARHKNTWIDSFSTGA
LTFLLALPTIALVYIVRLIGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPSTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLFVGD
IWMTMLDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=516448 I6H77_RS02900 WP_000759884.1 611216..612712(-) (amiC) [Streptococcus oralis strain FDAARGOS_1020]
ATGAAGAAATATATTTTTATGCGTGTATTGCGTTCATTGTTGTCTATTTTCTTGGTGACAACATTGACCTACACAATTAT
CTATACGATGGTTCCTCGAAAATTGATTTTCAAGCAGGATACCAACTATAACAAGATTGCAACGACGCCGGACAAGCGGG
ATAATTATGAAAATACCGTTTATGAGCGGATGGGCTATATCGAGTACTACGATACCAAGGAGTTGCAAGAAAAAGCTAGC
ACGATAGACTCATCTGTAACAGTAGATGCCAATGATACCAACAAGGCAATCTACGAAAAATACATCAACCAACTAGGAAA
TGGTTGGACGCTAGGTGTATTCTCAGAAAGTGGTCAATTCTATGCTACGCGTGAAATTCCGATTTTTGAACGTGTTTTCA
AATTCTATGCCAACTTGATTGATATTGATCATACAAACAAGATTCAAGACCCTGAAAATCCAAACTTGCAACGCTATCTT
CGTTTTGAAAATGACCCTGCTATCGGTTGGTCATTGGTTGGTTCAGGTACAAAACATAAGTATCTTTTGTATTTCAACAA
CCAATTCCCATTTGTACACCAAAACTTTGTAAACGTTAACTTAGGTGATTCTTACCCAACTTATGCAAACACACCAGTGC
TTCAAGTTATCACCCAAGGTCAGGGACAAACTAAGACATCAGAAGTTCAATTCCCTACAGGTAAAAAGACTTCATCTGTA
GATATCTACTCTCGTACCTACAAATCACCAAGTCAAGCAGACGCACGTGAGGTGGCAAACTATGGTAAGGACGATCCTTA
CACGGCTACAGAAAGCAATTACCAATATCCATCTATGATTGCAAGTTCAGCTGTTGCTGGTTTGATTGGTTTGATTATCT
CGTATGCTATCGCTATTCCACTTGGATCTGCTATGGCTCGCCACAAGAATACTTGGATTGACAGCTTCTCGACAGGTGCT
CTGACCTTCTTGCTTGCCCTTCCAACGATTGCCTTGGTATATATTGTGCGCTTGATTGGATCATCTATCGGTCTGCCAGA
CTCATTCCCTATCTTGGGGGCTGGAGATTGGCGTTCTTATGTCCTGCCAGCAGTTATTTTAGGTCTATTGGGTGCTCCAA
GTACGGCTATCTGGATTCGTCGTTACATGATCGACTTGCAATCTCAAGACTTCGTACGTTTTGCTCGCGCCAAAGGTTTG
TCTGAAAAAGAAATTTCAAATAAACACATCTTTAAAAATGCCATGGTTCCTTTGGTTTCAGGTATTCCTGGTGCCGTAAT
CGGAGTTATTGGTGGTGCAACATTGACAGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTTA
AGGCATCCAACAACTCAATGGTAGTTGGTCTCGTCTTCATCTTCACATGTATTTCTATCTTCTCACTCTTTGTAGGAGAT
ATCTGGATGACTATGCTTGATCCACGTATTAAATTGACAGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F2CWP0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

77.108

100

0.771
  amiC Streptococcus thermophilus LMG 18311

76.506

100

0.765
  amiC Streptococcus thermophilus LMD-9

76.305

100

0.763