Detailed information NTG0050547

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPSH112_RS07605
• Genome accession: NC_017741
• Coordinates: 1574950..1576383 (-)
• Length: 477 a.a.
• NCBI ID: WP_000751670.1
• Uniprot ID: A0AAE7P6A4
• Organism: Helicobacter pylori Shi112
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1569950..1581383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSH112_RS07580 (HPSH112_07690)	recG	1571093..1572958 (-)	1866	WP_001158333.1	ATP-dependent DNA helicase RecG	-
HPSH112_RS07585 (HPSH112_07695)	-	1573040..1573384 (+)	345	WP_000837020.1	hypothetical protein	-
HPSH112_RS07590 (HPSH112_07700)	-	1573388..1574023 (+)	636	WP_000668049.1	outer membrane protein	-
HPSH112_RS07595 (HPSH112_07705)	-	1574020..1574772 (-)	753	WP_000767499.1	exodeoxyribonuclease III	-
HPSH112_RS07605 (HPSH112_07710)	comH	1574950..1576383 (-)	1434	WP_000751670.1	hypothetical protein	Machinery gene
HPSH112_RS07615 (HPSH112_07715)	dnaA	1576603..1577970 (-)	1368	WP_000380573.1	chromosomal replication initiator protein DnaA	-
HPSH112_RS07620 (HPSH112_07720)	-	1578123..1578659 (+)	537	WP_014662167.1	purine-nucleoside phosphorylase	-
HPSH112_RS07625 (HPSH112_07725)	-	1578706..1578945 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPSH112_RS07630 (HPSH112_07730)	glmS	1578946..1580739 (+)	1794	WP_000334329.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54705.53 Da
• Isoelectric Point: 7.1210

>NTDB_id=50547 HPSH112_RS07605 WP_000751670.1 1574950..1576383(-) (comH) [Helicobacter pylori Shi112]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPLAT
PNKTSSANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAEKQAVRDPNVREFACG
KWVYDDENLQAYRPSILKRVDENKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQTEPTFYETSELAYSSTRKSEITRNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=50547 HPSH112_RS07605 WP_000751670.1 1574950..1576383(-) (comH) [Helicobacter pylori Shi112]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCCAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGCAACAAC
CTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAACAAGTTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTCACAAGA
TCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTAATGAAC
ACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAGCGCGTTGATGAAAACAAACAGACTGC
GACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCAAAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATCAAACAG
AGCCGACTTTCTATGAAACCAGCGAACTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.649	100	0.92