Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | IF764_RS02280 | Genome accession | NZ_CP062326 |
| Coordinates | 426273..427343 (+) | Length | 356 a.a. |
| NCBI ID | WP_000776409.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NAS_OP_043 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 421273..432343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF764_RS02250 (IF764_02245) | - | 421696..423159 (+) | 1464 | WP_001017870.1 | rhomboid family intramembrane serine protease | - |
| IF764_RS02255 (IF764_02250) | - | 423140..423343 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| IF764_RS02260 (IF764_02255) | - | 423340..424326 (+) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| IF764_RS02265 (IF764_02260) | - | 424326..424655 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| IF764_RS02270 (IF764_02265) | - | 424652..425275 (+) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| IF764_RS02275 (IF764_02270) | comGA | 425327..426301 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IF764_RS02280 (IF764_02275) | comGB | 426273..427343 (+) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| IF764_RS02285 (IF764_02280) | comGC | 427357..427668 (+) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IF764_RS02290 (IF764_02285) | comGD | 427646..428092 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IF764_RS02295 (IF764_02290) | comGE | 428079..428378 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| IF764_RS02300 (IF764_02295) | comGF | 428296..428793 (+) | 498 | WP_001796472.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IF764_RS02305 (IF764_02300) | - | 428890..429036 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| IF764_RS02310 (IF764_02305) | - | 429026..429550 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| IF764_RS02315 (IF764_02310) | gcvT | 429709..430800 (+) | 1092 | WP_000093344.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| IF764_RS02320 (IF764_02315) | gcvPA | 430820..432166 (+) | 1347 | WP_240029576.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41536.00 Da Isoelectric Point: 10.1113
>NTDB_id=487779 IF764_RS02280 WP_000776409.1 426273..427343(+) (comGB) [Staphylococcus aureus strain NAS_OP_043]
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGITILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNFTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVRQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGITILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNFTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVRQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Nucleotide
Download Length: 1071 bp
>NTDB_id=487779 IF764_RS02280 WP_000776409.1 426273..427343(+) (comGB) [Staphylococcus aureus strain NAS_OP_043]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGCATCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAACCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTCTCTATTTTTA
TTGCTATGATTATAATATTAAACTTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACTAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAAATTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CGGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTACCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGAAAGCTAGAAGTAGAACTAAAGCTATATTCGCAAATATTAGTGAGGCAAATAGAGGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGCATCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAACCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTCTCTATTTTTA
TTGCTATGATTATAATATTAAACTTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACTAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAAATTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CGGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTACCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGAAAGCTAGAAGTAGAACTAAAGCTATATTCGCAAATATTAGTGAGGCAAATAGAGGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
98.876 |
100 |
0.989 |
| comGB | Staphylococcus aureus N315 |
98.876 |
100 |
0.989 |