Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SAOV_RS08050 | Genome accession | NC_017337 |
| Coordinates | 1613561..1613860 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844409.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus subsp. aureus ED133 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1608561..1618860
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAOV_RS08025 (SAOV_1536) | gcvPA | 1609774..1611120 (-) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SAOV_RS08030 (SAOV_1537) | gcvT | 1611140..1612231 (-) | 1092 | WP_000093343.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAOV_RS08035 (SAOV_1538) | - | 1612389..1612913 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| SAOV_RS08040 | - | 1612903..1613049 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SAOV_RS08045 (SAOV_1539) | comGF | 1613146..1613643 (-) | 498 | WP_078061106.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAOV_RS08050 (SAOV_1540) | comGE | 1613561..1613860 (-) | 300 | WP_000844409.1 | hypothetical protein | Machinery gene |
| SAOV_RS08055 (SAOV_1541) | comGD | 1613847..1614293 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAOV_RS08060 (SAOV_1542) | comGC | 1614271..1614582 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAOV_RS08065 (SAOV_1543) | comGB | 1614596..1615666 (-) | 1071 | WP_000776418.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SAOV_RS08070 (SAOV_1544) | comGA | 1615638..1616612 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAOV_RS08075 (SAOV_1545) | - | 1616664..1617287 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SAOV_RS08080 (SAOV_1546) | - | 1617284..1617613 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SAOV_RS08085 (SAOV_1547) | - | 1617613..1618599 (-) | 987 | WP_000161317.1 | ROK family glucokinase | - |
| SAOV_RS08090 (SAOV_1548) | - | 1618596..1618799 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=46293 SAOV_RS08050 WP_000844409.1 1613561..1613860(-) (comGE) [Staphylococcus aureus subsp. aureus ED133]
MKSYKCKGSFLIDSMAGFLLIGLITLILIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLILIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=46293 SAOV_RS08050 WP_000844409.1 1613561..1613860(-) (comGE) [Staphylococcus aureus subsp. aureus ED133]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTAAT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTAAT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |