Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HR116_RS28055 Genome accession   NZ_CP054591
Coordinates   6069757..6070164 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain CDN118     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6064757..6075164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HR116_RS28035 pilK 6065689..6066564 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  HR116_RS28040 pilJ 6066625..6068673 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  HR116_RS28045 - 6068758..6069294 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  HR116_RS28050 pilH 6069345..6069710 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  HR116_RS28055 pilG 6069757..6070164 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  HR116_RS28060 gshB 6070419..6071372 (+) 954 WP_003100943.1 glutathione synthase -
  HR116_RS28065 - 6071519..6072412 (+) 894 WP_003084580.1 TonB family protein -
  HR116_RS28070 - 6072461..6073030 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  HR116_RS28075 ruvX 6073030..6073464 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  HR116_RS28080 pyrR 6073576..6074088 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HR116_RS28085 - 6074112..6075116 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=453780 HR116_RS28055 WP_003084583.1 6069757..6070164(-) (pilG) [Pseudomonas aeruginosa strain CDN118]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=453780 HR116_RS28055 WP_003084583.1 6069757..6070164(-) (pilG) [Pseudomonas aeruginosa strain CDN118]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385