Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   HPK29_RS05395 Genome accession   NZ_CP053704
Coordinates   1107840..1109108 (+) Length   422 a.a.
NCBI ID   WP_002338823.1    Uniprot ID   A0A4Y3JME5
Organism   Enterococcus faecium strain FS 86     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1102840..1114108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HPK29_RS05370 (HPK29_05380) tsf 1103576..1104457 (+) 882 WP_002293878.1 translation elongation factor Ts -
  HPK29_RS05375 (HPK29_05385) pyrH 1104593..1105315 (+) 723 WP_002293877.1 UMP kinase -
  HPK29_RS05380 (HPK29_05390) frr 1105318..1105875 (+) 558 WP_002293875.1 ribosome recycling factor -
  HPK29_RS05385 (HPK29_05395) - 1106070..1106882 (+) 813 WP_073441516.1 isoprenyl transferase -
  HPK29_RS05390 (HPK29_05400) - 1106879..1107679 (+) 801 WP_002308898.1 phosphatidate cytidylyltransferase -
  HPK29_RS05395 (HPK29_05405) eeP 1107840..1109108 (+) 1269 WP_002338823.1 RIP metalloprotease RseP Regulator
  HPK29_RS05400 (HPK29_05410) - 1109176..1110885 (+) 1710 WP_002314809.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46047.51 Da        Isoelectric Point: 4.8405

>NTDB_id=446431 HPK29_RS05395 WP_002338823.1 1107840..1109108(+) (eeP) [Enterococcus faecium strain FS 86]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIETDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIIPNGAAAEAGLKENDKVVSVDGKEIHSWN
DLTTVITKNPGKTLDFEIEREGKMQSVDVTPKSVESNGEKVGQLGIQAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVIGLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=446431 HPK29_RS05395 WP_002338823.1 1107840..1109108(+) (eeP) [Enterococcus faecium strain FS 86]
ATGAAAACGATACTAACATTTATCATTGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGTATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGGGATGAAACAG
AAGTAGTGACCTATCCTGTCGATCACGATGCGACGATTATTGAAACCGACGGAACAGAAATCAGAATTGCACCAAAAGAT
GTACAGTTCCAATCGGCTAAACTGTGGCAGCGTATGCTGACCAATTTTGCCGGTCCGATGAATAACTTTATCTTGGCAAT
CGTGTTATTCATTATTCTTGCATTCATGCAAGGCGGTGTTCAAGTGACAAATACTAATCGTGTAGGAGAGATTATCCCTA
ATGGTGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATAAGGTAGTTAGTGTGGACGGTAAAGAAATCCACTCTTGGAAC
GATTTGACAACAGTCATCACGAAAAATCCAGGTAAAACATTAGATTTTGAGATCGAACGAGAAGGTAAGATGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGCATACAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATCGGCGGAACACGTCAAGCTTTTAGCGGTTCATTAGAAATTTTCAAAGCCTTAGGTTCACTGTTT
ACAGGTTTTAGTTTAGATAAATTAGGCGGGCCTGTTATGATGTACCAATTGTCTTCAGAAGCAGCAAACCAAGGTGTAAC
AACTGTTATTGGTTTGATGGCGCTTCTTTCAATGAACCTGGGAATCGTCAATCTGCTTCCAATCCCTGCCTTAGATGGTG
GGAAATTAGTGTTGAATATTTTTGAAGGGATTCGTGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y3JME5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.972

100

0.547
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545