Detailed information NTG0442798

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: HHM66_RS09320
• Genome accession: NZ_CP053074
• Coordinates: 1889041..1889973 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1884041..1894973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHM66_RS09295 (HHM66_09315)	tsaD	1884531..1885547 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
HHM66_RS09300 (HHM66_09320)	rimI	1885537..1885962 (-)	426	WP_015058054.1	ribosomal protein S18-alanine N-acetyltransferase	-
HHM66_RS09305 (HHM66_09325)	tsaB	1885964..1886662 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
HHM66_RS09310 (HHM66_09330)	-	1886948..1887178 (+)	231	WP_015058055.1	DNA-dependent RNA polymerase subunit epsilon	-
HHM66_RS09315 (HHM66_09335)	rnjA	1887180..1888862 (+)	1683	WP_003056700.1	ribonuclease J1	-
HHM66_RS09320 (HHM66_09340)	amiF	1889041..1889973 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
HHM66_RS09325 (HHM66_09345)	oppD	1889966..1891018 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
HHM66_RS09330 (HHM66_09350)	-	1891030..1892061 (-)	1032	WP_003058013.1	ABC transporter permease	-
HHM66_RS09335 (HHM66_09355)	-	1892071..1892985 (-)	915	WP_003052794.1	ABC transporter permease	-
HHM66_RS09340 (HHM66_09360)	-	1893253..1894908 (-)	1656	WP_170078205.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=442798 HHM66_RS09320 WP_003060110.1 1889041..1889973(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=442798 HHM66_RS09320 WP_003060110.1 1889041..1889973(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTTTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526