Detailed information NTG0441138

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: HIN89_RS07685
• Genome accession: NZ_CP051862
• Coordinates: 1626301..1627002 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594576.1
• Uniprot ID: A0A429LRQ6
• Organism: Acinetobacter baumannii strain Ab-C102
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1621301..1632002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIN89_RS07650 (HIN89_07650)	kdsB	1621824..1622585 (+)	762	WP_004835301.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HIN89_RS07655 (HIN89_07655)	-	1622597..1623577 (+)	981	WP_004835299.1	DNA polymerase III, delta' subunit	-
HIN89_RS07660 (HIN89_07660)	-	1623589..1623930 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
HIN89_RS07665 (HIN89_07665)	-	1623948..1624721 (+)	774	WP_000497302.1	TatD family hydrolase	-
HIN89_RS07670 (HIN89_07670)	-	1624759..1625367 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
HIN89_RS07675 (HIN89_07675)	-	1625377..1625931 (+)	555	WP_000841373.1	type II secretion system protein	-
HIN89_RS07680 (HIN89_07680)	xcpV	1625921..1626301 (+)	381	WP_004835297.1	type II secretion system minor pseudopilin GspI	Machinery gene
HIN89_RS07685 (HIN89_07685)	xcpW	1626301..1627002 (+)	702	WP_000594576.1	type II secretion system minor pseudopilin GspJ	Machinery gene
HIN89_RS07690 (HIN89_07690)	gspK	1627002..1627961 (+)	960	WP_000301465.1	type II secretion system minor pseudopilin GspK	-
HIN89_RS07695 (HIN89_07695)	-	1628191..1628787 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
HIN89_RS07700 (HIN89_07700)	ung	1628838..1629551 (+)	714	WP_001177530.1	uracil-DNA glycosylase	-
HIN89_RS07705 (HIN89_07705)	-	1629548..1630672 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
HIN89_RS07710 (HIN89_07710)	tadA	1630679..1631182 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
HIN89_RS07715 (HIN89_07715)	-	1631252..1631695 (+)	444	Protein_1500	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26643.61 Da
• Isoelectric Point: 9.5501

>NTDB_id=441138 HIN89_RS07685 WP_000594576.1 1626301..1627002(+) (xcpW) [Acinetobacter baumannii strain Ab-C102]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEINIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=441138 HIN89_RS07685 WP_000594576.1 1626301..1627002(+) (xcpW) [Acinetobacter baumannii strain Ab-C102]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGATTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A429LRQ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991