Detailed information NTG0438297

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HGK50_RS07395
• Genome accession: NZ_CP051435
• Coordinates: 1547814..1549253 (-)
• Length: 479 a.a.
• NCBI ID: WP_202132846.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-005
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1542814..1554253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGK50_RS07370 (HGK50_07360)	recG	1543951..1545822 (-)	1872	WP_202132843.1	ATP-dependent DNA helicase RecG	-
HGK50_RS07375 (HGK50_07365)	-	1545904..1546248 (+)	345	WP_202132844.1	hypothetical protein	-
HGK50_RS07380 (HGK50_07370)	-	1546252..1546887 (+)	636	WP_202132845.1	outer membrane protein	-
HGK50_RS07385 (HGK50_07375)	-	1546884..1547636 (-)	753	WP_000767499.1	exodeoxyribonuclease III	-
HGK50_RS07395 (HGK50_07385)	comH	1547814..1549253 (-)	1440	WP_202132846.1	competence protein	Machinery gene
HGK50_RS07400 (HGK50_07390)	dnaA	1549481..1550848 (-)	1368	WP_202148147.1	chromosomal replication initiator protein DnaA	-
HGK50_RS07405 (HGK50_07395)	-	1551000..1551536 (+)	537	WP_202132848.1	purine-nucleoside phosphorylase	-
HGK50_RS07410 (HGK50_07400)	-	1551583..1551822 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HGK50_RS07415 (HGK50_07405)	glmS	1551823..1553616 (+)	1794	WP_202148148.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55024.03 Da
• Isoelectric Point: 6.7663

>NTDB_id=438297 HGK50_RS07395 WP_202132846.1 1547814..1549253(-) (comH) [Helicobacter pylori strain ASHA-005]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=438297 HGK50_RS07395 WP_202132846.1 1547814..1549253(-) (comH) [Helicobacter pylori strain ASHA-005]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACACAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.902	100	0.929