Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | HCR02_RS02330 | Genome accession | NZ_CP050505 |
| Coordinates | 448398..449378 (+) | Length | 326 a.a. |
| NCBI ID | WP_010951046.1 | Uniprot ID | Q5F9E4 |
| Organism | Neisseria gonorrhoeae strain BJ16148 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 443398..454378
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HCR02_RS02305 (HCR02_02300) | - | 444046..444555 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| HCR02_RS02310 (HCR02_02305) | - | 444787..445368 (-) | 582 | WP_047923823.1 | superoxide dismutase | - |
| HCR02_RS02315 (HCR02_02310) | dnaB | 445532..446938 (+) | 1407 | WP_047917169.1 | replicative DNA helicase | - |
| HCR02_RS02320 (HCR02_02315) | pilH | 447093..447758 (+) | 666 | WP_047918678.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| HCR02_RS02325 (HCR02_02320) | pilV | 447790..448401 (+) | 612 | WP_050169631.1 | type IV pilus modification protein PilV | Machinery gene |
| HCR02_RS02330 (HCR02_02325) | pilJ | 448398..449378 (+) | 981 | WP_010951046.1 | PilW family protein | Machinery gene |
| HCR02_RS02335 (HCR02_02330) | pilK | 449357..449968 (+) | 612 | WP_003687918.1 | pilus assembly protein | Machinery gene |
| HCR02_RS02340 (HCR02_02335) | pilL | 449970..450443 (+) | 474 | WP_025455870.1 | PilX family type IV pilin | Machinery gene |
| HCR02_RS02345 (HCR02_02340) | - | 450513..450821 (-) | 309 | WP_010951048.1 | AzlD family protein | - |
| HCR02_RS02350 (HCR02_02345) | - | 450818..451525 (-) | 708 | Protein_463 | AzlC family ABC transporter permease | - |
| HCR02_RS02355 (HCR02_02350) | dut | 451691..452143 (+) | 453 | WP_103195211.1 | dUTP diphosphatase | - |
| HCR02_RS02360 (HCR02_02355) | dapC | 452221..453408 (+) | 1188 | WP_047949582.1 | succinyldiaminopimelate transaminase | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35949.07 Da Isoelectric Point: 9.7237
>NTDB_id=433451 HCR02_RS02330 WP_010951046.1 448398..449378(+) (pilJ) [Neisseria gonorrhoeae strain BJ16148]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDVANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTKDDIVDSSNQTQSNLAKPGAKQENPLFSLKRSGMDKQLIPVAESIDIKYPGFIQRLNALVFQYGIDDLDASA
ETVVVSSCSKIAKPGKKISTLQEAKSALQITNDDKQNGNITRQKHVVNAYAVGRFGNNEESLFRFQLDDKGKWGNPQLLV
KKVKRMDVRYIYVSGCPEDEDAGKEEKFRYTNKFDKSKNAVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINATIRGGNV
CANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDVANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTKDDIVDSSNQTQSNLAKPGAKQENPLFSLKRSGMDKQLIPVAESIDIKYPGFIQRLNALVFQYGIDDLDASA
ETVVVSSCSKIAKPGKKISTLQEAKSALQITNDDKQNGNITRQKHVVNAYAVGRFGNNEESLFRFQLDDKGKWGNPQLLV
KKVKRMDVRYIYVSGCPEDEDAGKEEKFRYTNKFDKSKNAVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINATIRGGNV
CANRTL
Nucleotide
Download Length: 981 bp
>NTDB_id=433451 HCR02_RS02330 WP_010951046.1 448398..449378(+) (pilJ) [Neisseria gonorrhoeae strain BJ16148]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTATAATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGTGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTAATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATACTAAAGACGATATTGTTGATTCAAGTAATCAAACTCAATCTAACCTTGCAAAACCCGG
TGCCAAACAAGAAAATCCCCTTTTTTCCTTAAAAAGGAGCGGCATGGATAAACAACTGATTCCCGTTGCTGAATCCATAG
ATATTAAATATCCGGGTTTTATCCAGCGCCTTAACGCATTGGTTTTCCAATACGGTATCGATGATCTTGATGCGAGTGCT
GAGACTGTTGTAGTCAGCAGCTGTTCCAAAATAGCAAAACCGGGTAAGAAAATATCTACCTTGCAAGAAGCAAAGAGTGC
ATTACAGATTACTAATGATGATAAACAAAATGGAAATATCACCCGTCAGAAACATGTGGTCAATGCCTATGCGGTCGGCA
GGTTTGGCAATAATGAGGAAAGTTTGTTCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGTG
AAAAAGGTTAAACGTATGGATGTGCGGTATATTTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAAAA
ATTCAGATATACGAATAAATTCGACAAATCCAAAAATGCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGCC
TTAATGCCAAGATTGCCGCTTCTTCAGACAATAGTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTA
TGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTATAATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGTGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTAATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATACTAAAGACGATATTGTTGATTCAAGTAATCAAACTCAATCTAACCTTGCAAAACCCGG
TGCCAAACAAGAAAATCCCCTTTTTTCCTTAAAAAGGAGCGGCATGGATAAACAACTGATTCCCGTTGCTGAATCCATAG
ATATTAAATATCCGGGTTTTATCCAGCGCCTTAACGCATTGGTTTTCCAATACGGTATCGATGATCTTGATGCGAGTGCT
GAGACTGTTGTAGTCAGCAGCTGTTCCAAAATAGCAAAACCGGGTAAGAAAATATCTACCTTGCAAGAAGCAAAGAGTGC
ATTACAGATTACTAATGATGATAAACAAAATGGAAATATCACCCGTCAGAAACATGTGGTCAATGCCTATGCGGTCGGCA
GGTTTGGCAATAATGAGGAAAGTTTGTTCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGTG
AAAAAGGTTAAACGTATGGATGTGCGGTATATTTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAAAA
ATTCAGATATACGAATAAATTCGACAAATCCAAAAATGCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGCC
TTAATGCCAAGATTGCCGCTTCTTCAGACAATAGTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTA
TGCGCAAACAGAACACTTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
75.988 |
100 |
0.767 |