Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GVI46_RS03515 Genome accession   NZ_CP047699
Coordinates   670763..670957 (+) Length   64 a.a.
NCBI ID   WP_029324748.1    Uniprot ID   A0A2B0NED9
Organism   Priestia megaterium strain 5-3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 665763..675957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GVI46_RS03490 galT 665826..667349 (+) 1524 WP_097813394.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  GVI46_RS03495 - 667392..668276 (-) 885 WP_097813393.1 NAD(P)-dependent oxidoreductase -
  GVI46_RS03500 - 668480..668668 (-) 189 WP_013055400.1 YjzD family protein -
  GVI46_RS03505 - 668878..669618 (+) 741 WP_013055401.1 hypothetical protein -
  GVI46_RS03510 - 669800..670684 (+) 885 WP_013055402.1 NAD-dependent epimerase/dehydratase family protein -
  GVI46_RS03515 comZ 670763..670957 (+) 195 WP_029324748.1 ComZ family protein Regulator
  GVI46_RS03520 - 670986..671186 (-) 201 WP_029324750.1 hypothetical protein -
  GVI46_RS03525 - 671443..672381 (+) 939 WP_013055404.1 beta-ketoacyl-ACP synthase III -
  GVI46_RS03530 fabF 672421..673662 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  GVI46_RS03535 - 673768..674541 (+) 774 WP_013055406.1 DUF2268 domain-containing protein -
  GVI46_RS03540 - 674768..675790 (+) 1023 WP_013055407.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7330.37 Da        Isoelectric Point: 3.9484

>NTDB_id=415484 GVI46_RS03515 WP_029324748.1 670763..670957(+) (comZ) [Priestia megaterium strain 5-3]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMSDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=415484 GVI46_RS03515 WP_029324748.1 670763..670957(+) (comZ) [Priestia megaterium strain 5-3]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTGCAGCCGGTATTGACATTACTAACAAAAGTAATGAGCGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0NED9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563

Multiple sequence alignment