Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | GSY53_RS09790 | Genome accession | NZ_CP047325 |
| Coordinates | 1885619..1886068 (-) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis strain GOT9 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1880619..1891068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSY53_RS09755 (GSY53_09755) | yckA | 1880887..1881567 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| GSY53_RS09760 (GSY53_09760) | yckB | 1881577..1882440 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| GSY53_RS09765 (GSY53_09765) | - | 1882602..1882799 (+) | 198 | Protein_1875 | hypothetical protein | - |
| GSY53_RS09770 (GSY53_09770) | - | 1882836..1883156 (+) | 321 | Protein_1876 | RDD family protein | - |
| GSY53_RS09775 (GSY53_09775) | yckD | 1883238..1883570 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| GSY53_RS09780 (GSY53_09780) | bglC | 1883724..1885157 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| GSY53_RS09785 (GSY53_09785) | nin/comJ | 1885194..1885592 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| GSY53_RS09790 (GSY53_09790) | nucA/comI | 1885619..1886068 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| GSY53_RS09795 (GSY53_09795) | tlpC | 1886236..1887957 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| GSY53_RS09800 (GSY53_09800) | hxlB | 1888068..1888625 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| GSY53_RS09805 (GSY53_09805) | hxlA | 1888631..1889263 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| GSY53_RS09810 (GSY53_09810) | hxlR | 1889496..1889858 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=412707 GSY53_RS09790 WP_003246436.1 1885619..1886068(-) (nucA/comI) [Bacillus subtilis strain GOT9]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=412707 GSY53_RS09790 WP_003246436.1 1885619..1886068(-) (nucA/comI) [Bacillus subtilis strain GOT9]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |